[new port] biology/canu: Single molecule sequence assembler

[jwb]

Summary

[new port] biology/canu: Single molecule sequence assembler
Approved by: jrm (mentor) or wen (mentor)
Differential to be added to log

Upstream has already patched head to conform to filesystem hierarchy standards, so the post-build hacks will go away in 1.7.

Test Plan

portlint -C and stage-qa clean
Poudriere tested on {10.3,11.1}-{amd64,i386}

User-tested by researchers

[jrm]

biology/canu/Makefile

4

missing tab?

[jwb]

Added that to my checklist

[mat]

head/biology/canu/Makefile

14–15 ↗

(On Diff #36898)

Why += ?

head/biology/canu/pkg-plist

54–55 ↗

(On Diff #36898)

installing only static libraries seems like a bad idea.

[jwb]

Good catch on the +=, that was an oversight.

The upstream build system does not support shared libs and it's a nightmare
to patch. The developers are receptive to suggestion, though. I plan to
open an issue asking for shared libs in a future release.