Instructor for Research Computing, etc. at the University of Wisconsin -- Milwaukee
User Details
User Details
- User Since
- Nov 27 2017, 4:37 PM (261 w, 4 d)
Thu, Nov 24
Thu, Nov 24
jwb committed R11:4b987075629f: biology/megahit: Add cmake patch to respect ports build flags (authored by jwb).
biology/megahit: Add cmake patch to respect ports build flags
Wed, Nov 23
Wed, Nov 23
jwb committed R11:35dc7ffe64b4: games/solver: Math training game using C and SDL2 (authored by jwb).
games/solver: Math training game using C and SDL2
Tue, Nov 22
Tue, Nov 22
jwb committed R11:acb3a0de6468: biology/megahit: Ultra-fast single-node metagenomics assembly (authored by jwb).
biology/megahit: Ultra-fast single-node metagenomics assembly
Wed, Nov 16
Wed, Nov 16
science/vmd: Update to 1.9.4a57
Fri, Nov 4
Fri, Nov 4
biology/bowtie2: Update to 2.5.0
Oct 16 2022
Oct 16 2022
sysutils/parafly: Fix build on armv7
Oct 11 2022
Oct 11 2022
biology/hmmer: Update to 3.3.2
Oct 7 2022
Oct 7 2022
sysutils/parafly: Fix build on armv7
Sep 29 2022
Sep 29 2022
sysutils/auto-admin: Update to 0.7.13.2
Sep 21 2022
Sep 21 2022
biology/vsearch: Update to 2.22.1
Sep 19 2022
Sep 19 2022
sysutils/auto-admin: Update to 0.7.13
Sep 16 2022
Sep 16 2022
biology/vsearch: Update to 2.21.2
Sep 11 2022
Sep 11 2022
sysutils/desktop-installer: Update to 0.7.8-3
sysutils/auto-admin: Update to 0.7.12.13
Aug 28 2022
Aug 28 2022
archivers/streamvbyte: Update to 0.5.1
Aug 17 2022
Aug 17 2022
jwb committed R11:88833e7cce1a: sysutils/desktop-installer: Drop bsdstats install option (authored by jwb).
sysutils/desktop-installer: Drop bsdstats install option
Aug 10 2022
Aug 10 2022
sysutils/auto-admin: Update to 0.7.12.4
Aug 4 2022
Aug 4 2022
sysutils/spcm: Update to 0.5.7.6
sysutils/desktop-installer: Update to 0.7.8
auto-admin: Update to 0.7.12
Jul 12 2022
Jul 12 2022
biology/pooler: Update to 1.85
Jul 10 2022
Jul 10 2022
x11/coreterminal: Update to latest commit
deskutils/coregarage: Update to latest commit
deskutils/libcprime: Update to latest commit
Jun 12 2022
Jun 12 2022
math/basic-stats: Update to 0.1.2
Jun 11 2022
Jun 11 2022
jwb committed R11:7d736c93c291: math/basic-stats: Command-line tool for statistics on tabular data (authored by jwb).
math/basic-stats: Command-line tool for statistics on tabular data
biology/vcf2hap: Update to 0.1.6
biology/peak-classifier: Update to 0.1.4
biology/ad2vcf: Update to 0.1.6
biology/vcf-split: Update to 0.1.5
biology/biolibc-tools: Update to 0.1.3
biology/biolibc: Update to 0.2.3
devel/libxtend: Update to 0.1.6
Jun 10 2022
Jun 10 2022
jwb committed R11:f3b9375eb209: security/globalprotect-openconnect: Update to 1.4.7 (authored by jwb).
security/globalprotect-openconnect: Update to 1.4.7
Jun 8 2022
Jun 8 2022
sysutils/spcm: Update to 0.5.7
sysutils/desktop-installer: Update to 0.7.7.4
sysutils/auto-admin: Update to 0.7.11
Jun 7 2022
Jun 7 2022
x11/coreterminal: Update to latest commit
deskutils/coregarage: Update to latest commit
deskutils/libcprime: Update to 4.3.0
Jun 3 2022
Jun 3 2022
jwb committed R11:06b803fa9843: security/globalprotect-openconnect: Update to 1.4.6 (authored by jwb).
security/globalprotect-openconnect: Update to 1.4.6
May 30 2022
May 30 2022
jwb committed R11:14d57822ed4c: security/globalprotect/openconnect: Update to 1.4.5 (authored by jwb).
security/globalprotect/openconnect: Update to 1.4.5
jwb accepted D35346: Introduce versioned Go ports.
biology/ncbi-entrez-direct looks fine.
May 26 2022
May 26 2022
jwb committed R11:a98b1edcc998: security/globalprotect-openconnect: Update to 1.4.4 (authored by jwb).
security/globalprotect-openconnect: Update to 1.4.4
May 22 2022
May 22 2022
math/intervaltree: Deprecate
jwb added a comment to D35280: cleanup: remove expired versions of OpenJDK (12 through 16).
The SnpEff site clearly states a Java 12 requirement: http://pcingola.github.io/SnpEff/
May 8 2022
May 8 2022
biology/py-dna-features-viewer: Update to 3.1.1
Apr 29 2022
Apr 29 2022
archivers/vbz-compression: Update to 1.0.2
Mar 25 2022
Mar 25 2022
biology/py-ont-fast5-api: Update to 4.0.2
Mar 21 2022
Mar 21 2022
biology/fastq-trim: Update to 0.1.1.4
biology/fastq-trim: Update to 0.1.1.2
Mar 20 2022
Mar 20 2022
biology/bolt-lmm: Update to 2.3.6
Mar 19 2022
Mar 19 2022
jwb committed R11:a47115b9cad4: biology/fastq-trim: Lightening fast sequence read trimmer (authored by jwb).
biology/fastq-trim: Lightening fast sequence read trimmer
Mar 15 2022
Mar 15 2022
biology/vcf2hap: Update to 0.1.5
biology/vcf-split: Update to 0.1.4
biology/peak-classifier: Update to 0.1.3
biology/ad2vcf: Update to 0.1.5
biology/biolibc-tools: Update to 0.1.2
biology/biolibc: Update to 0.2.2
devel/libxtend: Update to 0.1.5
Mar 14 2022
Mar 14 2022
biology/pooler: Update to 1.84
Mar 13 2022
Mar 13 2022
sysutils/desktop-installer: Update to 0.7.7
sysutils/autoadmin: Update to 0.7.10
Mar 7 2022
Mar 7 2022
jwb committed R11:e48763c72d43: security/globalprotect-openconnect: Update to 1.4.1 (authored by jwb).
security/globalprotect-openconnect: Update to 1.4.1
Mar 4 2022
Mar 4 2022
x11/lumina-core: Fix LScreensaver password check
Mar 1 2022
Mar 1 2022
jwb committed R11:41b6a246b075: security/globalprotect-openconnect: OpenConnect GUI for GlobalProtect (authored by jwb).
security/globalprotect-openconnect: OpenConnect GUI for GlobalProtect
Feb 26 2022
Feb 26 2022
jwb committed R11:f46ddab3d69f: biology/bio-mocha: Update bcftools submodule to 1.15 (authored by jwb).
biology/bio-mocha: Update bcftools submodule to 1.15
biology/bcftools: Update to 1.15
biology/samtools: Update to 1.15
biology/htslib: Update to 1.15
Feb 23 2022
Feb 23 2022
jwb committed R11:f7972afbeec5: x11/lumina-core: Replace apm battery monitoring with sysctls() (authored by jwb).
x11/lumina-core: Replace apm battery monitoring with sysctls()
Feb 22 2022
Feb 22 2022
jwb committed R11:9f318b638b3b: x11/lumina-core: Add fluxbox-tenr-styles-pack to RUN_DEPENDS (authored by jwb).
x11/lumina-core: Add fluxbox-tenr-styles-pack to RUN_DEPENDS
Feb 15 2022
Feb 15 2022
sysutils/desktop-installer: Update to 0.7.6.6
Feb 12 2022
Feb 12 2022
jwb committed R11:72923f58ba52: biology/py-dna-features-viewer: Add missing dependency (authored by jwb).
biology/py-dna-features-viewer: Add missing dependency
sysutils/auto-admin: Update to 0.7.9.12
Feb 11 2022
Feb 11 2022
jwb committed R11:21daf02816df: sysutils/linux-miniconda-installer: Bump python dep to 3.9 (authored by jwb).
sysutils/linux-miniconda-installer: Bump python dep to 3.9
Feb 9 2022
Feb 9 2022
benchmarks/mst-bench: Update to 0.2.1-18
Feb 6 2022
Feb 6 2022
biology/freebayes: Update to 1.3.6
Feb 3 2022
Feb 3 2022
jwb committed R11:0939abbdf631: biology/py-dna-features-viewer: Add py-bcbio-gff dep (authored by jwb).
biology/py-dna-features-viewer: Add py-bcbio-gff dep
jwb committed R11:d936c94c64a8: biology/py-bcbio-gff: Read and write Generic Feature Format (GFF) (authored by jwb).
biology/py-bcbio-gff: Read and write Generic Feature Format (GFF)
jwb committed R11:2b1ef5b34e0e: biology/py-dna-features-viewer: Python lib to visualize DNA features (authored by jwb).
biology/py-dna-features-viewer: Python lib to visualize DNA features
Feb 2 2022
Feb 2 2022
auto-admin: Unbreak auto-install-base-components
Jan 29 2022
Jan 29 2022
sysutils/spcm: Update to 0.5.6
jwb committed R11:b9bff6513119: sysutils/ganglia-webfrontend: Flavorize to prevent build with PHP 8 (authored by jwb).
sysutils/ganglia-webfrontend: Flavorize to prevent build with PHP 8
jwb committed R11:b829b65dc512: multimedia/kodi: Unbreak package, failing due to missing libdvdcss (authored by jwb).
multimedia/kodi: Unbreak package, failing due to missing libdvdcss
jwb committed R11:94753e8d69e3: multimedia/kodi: Unbreak package, failing due to missing libdvdcss (authored by jwb).
multimedia/kodi: Unbreak package, failing due to missing libdvdcss
Jan 28 2022
Jan 28 2022
biology/vcflib: Update to 1.0.3
Jan 23 2022
Jan 23 2022
biology/vsearch: Update to 2.21.1
Jan 21 2022
Jan 21 2022
sysutils/desktop-installer: Update to 0.7.6.2
sysutils/auto-admin: Update to 0.7.9
jwb committed R11:265238ee6c37: biology/fastp: Add USE_GCC to hack around seg faults (authored by jwb).
biology/fastp: Add USE_GCC to hack around seg faults
biology/bowtie2: Update to 2.4.5
Jan 19 2022
Jan 19 2022
biology/kallisto: Update to 0.48.0
Jan 13 2022
Jan 13 2022
biology/bio-mocha: Update to 1.14-20220112
Jan 9 2022
Jan 9 2022
jwb added a comment to D33733: Add a "bgnow" NFS mount option that causes the mount to go background immediately.
Only thing I would change is use a consistent format for the bit masks: E.g. 0x04, 0x08, 0x10.
Jan 8 2022
Jan 8 2022
biology/vsearch: Update to 2.19.0
Dec 31 2021
Dec 31 2021
biology/minimap2: Update to 2.24
Dec 30 2021
Dec 30 2021
biology/fastp: Update to 0.23.2
Dec 22 2021
Dec 22 2021
sysutils/slurm-wlm: Release to ports@