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biology/bowtie2: update to bug-fix release 2.2.9
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Authored by jrm on Oct 7 2016, 5:51 PM.
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Details

Summary

biology/bowtie2: update to bug-fix release 2.2.9

Test Plan

portlint -AC: Ok
testport: OK (poudriere: 9.3-RELEASE-p45, amd64)
testport: OK (poudriere: 10.3-RELEASE-p7, amd64)
testport: OK (poudriere: 11.0-RC3, amd64)

Diff Detail

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rP FreeBSD ports repository
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Event Timeline

jrm retitled this revision from to biology/bowtie2: update to bug-fix release 2.2.9.
jrm updated this object.
jrm edited the test plan for this revision. (Show Details)
jrm added reviewers: swills, AMDmi3.
AMDmi3 requested changes to this revision.Oct 9 2016, 10:48 PM
AMDmi3 edited edge metadata.

I'd also:

  • fix license (GPLv3+)
  • add LICENSE_FILE
  • optionize DOCS and EXAMPLES
  • fix whitespace (2 tabs) in the first block
This revision now requires changes to proceed.Oct 9 2016, 10:48 PM
jrm edited edge metadata.

Incorporate suggestions from AMDmi3

AMDmi3 edited edge metadata.
This revision is now accepted and ready to land.Oct 10 2016, 10:57 AM
biology/bowtie2/Makefile
6 ↗(On Diff #21214)

There may be missing a <tab> after the = here.

jrm edited edge metadata.

bowtie2-build and bowtie2-inspect need python

This revision now requires review to proceed.Dec 19 2016, 2:44 AM
jrm marked an inline comment as done.
jrm edited edge metadata.

Address mat's comment (add a tab)

swills edited edge metadata.

Approved

This revision is now accepted and ready to land.Dec 20 2016, 4:38 PM
This revision was automatically updated to reflect the committed changes.