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math/R: Fix build with clang/openmp 13
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Authored by jrm on Oct 3 2021, 2:27 PM.

Details

Summary

The mgcv package is one of the recommended packages to be installed with
R. A problem with mgcv and clang/openmp 13 is that mgcv versions prior
to 1.8-37 include omp.h after including R.h. This causes a conflict
between "#define match" and an openmp pragma line, which uses match().
This problem was fixed in mgcv 1.8-37, so switch to this newer version.

PR: 258887
Reported by: dim

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Repository
R11 FreeBSD ports repository
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Event Timeline

jrm requested review of this revision.Oct 3 2021, 2:27 PM
  • Fix plist issue when the NLS knob is on
  • Bump PORTREVISION

Builds OK for me, also installs, and seems to run (at least very rudimentarily :) ):

% R

R version 4.1.1 (2021-08-10) -- "Kick Things"
Copyright (C) 2021 The R Foundation for Statistical Computing
Platform: amd64-portbld-freebsd14.0 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
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Type 'demo()' for some demos, 'help()' for on-line help, or
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> print("Hello World")
[1] "Hello World"
> sin(pi)
[1] 1.224647e-16
> quit()
Save workspace image? [y/n/c]: n
This revision is now accepted and ready to land.Oct 3 2021, 7:00 PM
This revision was automatically updated to reflect the committed changes.