D16569.diff
No OneTemporary
Actions

Size

1 KB

Referenced Files

None

Subscribers

None

D16569.diff
View Options

	Index: head/biology/samtools/Makefile
	===================================================================
	--- head/biology/samtools/Makefile
	+++ head/biology/samtools/Makefile
	@@ -2,7 +2,7 @@
	# $FreeBSD$

	PORTNAME= samtools
	-PORTVERSION= 1.6
	+DISTVERSION= 1.9
	CATEGORIES= biology

	MAINTAINER= cartwright@asu.edu
	@@ -15,16 +15,15 @@
	LIB_DEPENDS= libhts.so:biology/htslib
	TEST_DEPENDS= bash:shells/bash

	+USES= autoreconf gmake localbase ncurses \
	+ perl5 python:env shebangfix
	+
	USE_GITHUB= yes

	-USES= autoreconf gmake ncurses perl5 python:env shebangfix
	USE_PERL5= test
	GNU_CONFIGURE= yes
	SUB_FILES= pkg-message
	SHEBANG_FILES= misc/.pl misc/.py misc/plot-bamstats test/test.pl
	-
	-CPPFLAGS+= -I${LOCALBASE}/include
	-LDFLAGS+= -L${LOCALBASE}/lib

	TEST_TARGET= test

	Index: head/biology/samtools/distinfo
	===================================================================
	--- head/biology/samtools/distinfo
	+++ head/biology/samtools/distinfo
	@@ -1,3 +1,3 @@
	-TIMESTAMP = 1508304738
	-SHA256 (samtools-samtools-1.6_GH0.tar.gz) = c0d1ffefe441297ee0eec0e032ac3131519f82fd1a11d38fbcec19e2d5822b28
	-SIZE (samtools-samtools-1.6_GH0.tar.gz) = 4014195
	+TIMESTAMP = 1532906637
	+SHA256 (samtools-samtools-1.9_GH0.tar.gz) = 211600bd180d01030b3fe25baa7ae1c105106bed6c3f8d993f41dd278d44c637
	+SIZE (samtools-samtools-1.9_GH0.tar.gz) = 4098992