Index: head/biology/iqtree/Makefile
===================================================================
--- head/biology/iqtree/Makefile	(revision 561367)
+++ head/biology/iqtree/Makefile	(revision 561368)
@@ -1,39 +1,40 @@
 # $FreeBSD$
 
 PORTNAME=	iqtree
 DISTVERSIONPREFIX=	v
 DISTVERSION=	2.0.6
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	biology
 
 MAINTAINER=	jrm@FreeBSD.org
 COMMENT=	Efficient phylogenomic software by maximum likelihood
 
 LICENSE=	GPLv2
 LICENSE_FILE=	${WRKSRC}/LICENSE
 
 BROKEN_aarch64=	fails to compile: unrecognized command line option '-msse3'
 BROKEN_armv6=	fails to compile: unrecognized command line options '-m32' and '-msse3'
 BROKEN_armv7=	fails to compile: unrecognized command line options '-m32' and '-msse3'
+BROKEN_i386=	ld: error: unable to find library -latomic (see bug 230888)
 BROKEN_powerpc64=	fails to build: GCC version must be at least 4.8!
 
 LIB_DEPENDS=	libboost_filesystem.so:devel/boost-libs
 
-USES=		cmake compiler:openmp eigen:3
+USES=		cmake compiler:c++11-lang eigen:3
 USE_GITHUB=	yes
 GH_ACCOUNT=	Cibiv
 GH_PROJECT=	IQ-TREE
 
 PLIST_FILES=	bin/iqtree
 PORTEXAMPLES=	example.cf example.nex example.phy models.nex
 
 OPTIONS_DEFINE=	EXAMPLES
 
 do-install:
 	${INSTALL_PROGRAM} ${BUILD_WRKSRC}/iqtree2 ${STAGEDIR}${PREFIX}/bin/iqtree
 
 do-install-EXAMPLES-on:
 	@${MKDIR} ${STAGEDIR}${EXAMPLESDIR}
 	${INSTALL_DATA} ${WRKSRC}/example/* ${STAGEDIR}${EXAMPLESDIR}
 
 .include <bsd.port.mk>
Index: head/biology/iqtree/files/patch-CMakeLists.txt
===================================================================
--- head/biology/iqtree/files/patch-CMakeLists.txt	(nonexistent)
+++ head/biology/iqtree/files/patch-CMakeLists.txt	(revision 561368)
@@ -0,0 +1,11 @@
+--- CMakeLists.txt.orig	2021-01-11 20:50:45 UTC
++++ CMakeLists.txt
+@@ -323,7 +323,7 @@ if (NOT IQTREE_FLAGS MATCHES "single")
+ 
+     if(CLANG AND APPLE)
+         link_directories(${PROJECT_SOURCE_DIR}/libmac)
+-    elseif (WIN32 OR UNIX)
++    elseif (WIN32 OR UNIX AND NOT ${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD")
+         if (BINARY32)
+             link_directories(${PROJECT_SOURCE_DIR}/lib32)
+         else()

Property changes on: head/biology/iqtree/files/patch-CMakeLists.txt
___________________________________________________________________
Added: fbsd:nokeywords
## -0,0 +1 ##
+yes
\ No newline at end of property
Added: svn:eol-style
## -0,0 +1 ##
+native
\ No newline at end of property
Added: svn:mime-type
## -0,0 +1 ##
+text/plain
\ No newline at end of property