Index: head/biology/mummer/Makefile
===================================================================
--- head/biology/mummer/Makefile	(revision 553297)
+++ head/biology/mummer/Makefile	(revision 553298)
@@ -1,30 +1,30 @@
 # Created by: Tony Maher
 # $FreeBSD$
 
 PORTNAME=	mummer
 DISTVERSIONPREFIX=	v
 DISTVERSION=	4.0.0beta2-2
-PORTREVISION=	2
+PORTREVISION=	3
 DISTVERSIONSUFFIX=	-g277dac5
 CATEGORIES=	biology
 
 MAINTAINER=	yuri@FreeBSD.org
 COMMENT=	Modular system for rapid whole genome alignment
 
 LICENSE=	ART10
 LICENSE_FILE=	${WRKSRC}/LICENSE.md
 
 BUILD_DEPENDS=	yaggo:devel/yaggo
 
 USES=		autoreconf compiler:c++11-lang gmake libtool perl5 shebangfix
 GNU_CONFIGURE=	yes
 CONFIGURE_ARGS=	--disable-static
 USE_GITHUB=	yes
 GH_ACCOUNT=	${PORTNAME}4
 USE_LDCONFIG=	yes
 
 SHEBANG_FILES=	scripts/*.pl
 perl_OLD_CMD=	__PERL_PATH
 _SHEBANG_REINPLACE_ARGS+=	-e "s|__BIN_DIR|${PREFIX}/bin|g;s|__AUX_BIN_DIR|${PREFIX}/libexec/mummer|g;s|__SCRIPT_DIR|${PREFIX}/libexec/mummer|g"
 
 .include <bsd.port.mk>
Index: head/biology/mummer/files/patch-include_mummer_postnuc.hh
===================================================================
--- head/biology/mummer/files/patch-include_mummer_postnuc.hh	(nonexistent)
+++ head/biology/mummer/files/patch-include_mummer_postnuc.hh	(revision 553298)
@@ -0,0 +1,11 @@
+--- include/mummer/postnuc.hh.orig	2020-10-25 22:49:14 UTC
++++ include/mummer/postnuc.hh
+@@ -67,7 +67,7 @@ struct Alignment
+                                 //      trust me, it is a very helpful value
+   long int         Errors, SimErrors, NonAlphas; // errors, similarity errors, nonalphas
+ 
+-  Alignment(const Match& m, const char dir)
++  Alignment(const Match& m, const signed char dir)
+     : dirB(dir)
+     , sA(m.sA)
+     , sB(m.sB)

Property changes on: head/biology/mummer/files/patch-include_mummer_postnuc.hh
___________________________________________________________________
Added: fbsd:nokeywords
## -0,0 +1 ##
+yes
\ No newline at end of property
Added: svn:eol-style
## -0,0 +1 ##
+native
\ No newline at end of property
Added: svn:mime-type
## -0,0 +1 ##
+text/plain
\ No newline at end of property