Index: head/biology/hyphy/Makefile =================================================================== --- head/biology/hyphy/Makefile (revision 552525) +++ head/biology/hyphy/Makefile (revision 552526) @@ -1,26 +1,26 @@ # $FreeBSD$ PORTNAME= hyphy -DISTVERSION= 2.5.19 +DISTVERSION= 2.5.20 CATEGORIES= biology MAINTAINER= jrm@FreeBSD.org COMMENT= Hypothesis testing using Phylogenies LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE ONLY_FOR_ARCHS= amd64 i386 LIB_DEPENDS= libcurl.so:ftp/curl USES= cmake compiler:openmp localbase:ldflags ssl USE_GITHUB= yes GH_ACCOUNT= veg OPTIONS_DEFINE= AVX AVX_DESC= Advanced vector extensions support AVX_CMAKE_OFF= -DNOAVX:BOOL=ON .include Index: head/biology/hyphy/distinfo =================================================================== --- head/biology/hyphy/distinfo (revision 552525) +++ head/biology/hyphy/distinfo (revision 552526) @@ -1,3 +1,3 @@ -TIMESTAMP = 1602549659 -SHA256 (veg-hyphy-2.5.19_GH0.tar.gz) = 44464c24b380aa25161639cee3ab224d9b5c29fe8079281be2bdde8f171a2e1b -SIZE (veg-hyphy-2.5.19_GH0.tar.gz) = 5315357 +TIMESTAMP = 1602886612 +SHA256 (veg-hyphy-2.5.20_GH0.tar.gz) = 6c8e2cfbb9d61ab9d6677f3fca5ea51e729943bef213bed6d03dd0f6d6078925 +SIZE (veg-hyphy-2.5.20_GH0.tar.gz) = 5325417 Index: head/biology/hyphy/files/patch-src_core_matrix.cpp =================================================================== --- head/biology/hyphy/files/patch-src_core_matrix.cpp (nonexistent) +++ head/biology/hyphy/files/patch-src_core_matrix.cpp (revision 552526) @@ -0,0 +1,11 @@ +--- src/core/matrix.cpp.orig 2020-10-16 23:15:05 UTC ++++ src/core/matrix.cpp +@@ -2236,7 +2236,7 @@ bool _Matrix::IncreaseStorage (void) { + } else { + theData = (hyFloat*) MemReallocate(theData, lDim*sizeof(void*)); + for (long i = lDim-allocationBlock; i < lDim; i++) { +- theData [i] = ZEROPOINTER; ++ theData [i] = ZEROOBJECT; + } + } + } else { Property changes on: head/biology/hyphy/files/patch-src_core_matrix.cpp ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +yes \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property