Index: head/science/Makefile =================================================================== --- head/science/Makefile (revision 501791) +++ head/science/Makefile (revision 501792) @@ -1,328 +1,329 @@ # $FreeBSD$ # COMMENT = Scientific ports SUBDIR += 2d-rewriter SUBDIR += ALPSCore SUBDIR += InsightToolkit SUBDIR += PETSc SUBDIR += R-cran-AMORE SUBDIR += R-cran-DCluster SUBDIR += R-cran-Epi SUBDIR += R-cran-bayesm SUBDIR += R-cran-cmprsk SUBDIR += R-cran-e1071 SUBDIR += R-cran-eco SUBDIR += R-cran-epicalc SUBDIR += R-cran-etm SUBDIR += R-cran-fastICA SUBDIR += R-cran-kernlab SUBDIR += R-cran-snow SUBDIR += R-cran-som SUBDIR += R-cran-udunits2 SUBDIR += abinit SUBDIR += afni SUBDIR += agrum SUBDIR += aircraft-datcom SUBDIR += antioch SUBDIR += apbs SUBDIR += atom SUBDIR += atompaw SUBDIR += avogadro2 SUBDIR += avogadrolibs SUBDIR += bagel SUBDIR += bddsolve SUBDIR += berkeleygw SUBDIR += bodr SUBDIR += brian SUBDIR += buddy SUBDIR += cdcl SUBDIR += cdf SUBDIR += cdo SUBDIR += cgnslib SUBDIR += cgribex SUBDIR += checkmol SUBDIR += chemical-mime-data SUBDIR += chemps2 SUBDIR += chemtool SUBDIR += chemtool-devel SUBDIR += chrono SUBDIR += clhep SUBDIR += clipper SUBDIR += code_saturne SUBDIR += colt SUBDIR += coordgenlibs SUBDIR += coot SUBDIR += cp2k SUBDIR += cp2k-data SUBDIR += crf++ SUBDIR += dalton SUBDIR += datawarrior SUBDIR += dcl SUBDIR += devisor SUBDIR += dftbplus SUBDIR += dkh SUBDIR += dlib-cpp SUBDIR += dlpoly-classic SUBDIR += drawxtl SUBDIR += dvc SUBDIR += eccodes SUBDIR += elk SUBDIR += epte SUBDIR += erd SUBDIR += erkale SUBDIR += erkale-pseudopotentials SUBDIR += esys-particle SUBDIR += fastcap SUBDIR += fasthenry SUBDIR += fisicalab SUBDIR += fleur SUBDIR += fsom SUBDIR += fvcom SUBDIR += fvcom-mpi SUBDIR += gabedit SUBDIR += gamess-us SUBDIR += gchemutils SUBDIR += gdma SUBDIR += getdp SUBDIR += ghemical SUBDIR += ghmm SUBDIR += gnudatalanguage SUBDIR += gpaw-setups SUBDIR += gramps SUBDIR += grib_api SUBDIR += gromacs SUBDIR += gsmc SUBDIR += gtamsanalyzer SUBDIR += gwyddion SUBDIR += h5utils SUBDIR += h5z-zfp SUBDIR += harminv SUBDIR += hdf SUBDIR += hdf5 SUBDIR += hdf5-18 SUBDIR += healpix SUBDIR += hypre SUBDIR += iboview SUBDIR += isaac-cfd SUBDIR += jdftx SUBDIR += jmol SUBDIR += jstrack SUBDIR += kalzium SUBDIR += kst2 SUBDIR += lammps SUBDIR += lamprop SUBDIR += latte SUBDIR += libaec SUBDIR += libccp4 SUBDIR += libcint SUBDIR += libctl SUBDIR += libefp SUBDIR += libgeodecomp SUBDIR += libghemical SUBDIR += libgridxc SUBDIR += libint SUBDIR += libint2 SUBDIR += libkml SUBDIR += liblinear SUBDIR += libmsym SUBDIR += liboglappth SUBDIR += libquantum SUBDIR += libssm SUBDIR += libsvm SUBDIR += libsvm-python SUBDIR += libxc SUBDIR += liggghts SUBDIR += lm SUBDIR += luscus SUBDIR += madness SUBDIR += maeparser SUBDIR += massxpert SUBDIR += mbdyn SUBDIR += mcstas SUBDIR += mcstas-comps SUBDIR += mcxtrace SUBDIR += mcxtrace-comps SUBDIR += mdynamix SUBDIR += medit SUBDIR += meep SUBDIR += metaf2xml SUBDIR += metaphysicl SUBDIR += minc2 SUBDIR += mmdb2 SUBDIR += mmtf-cpp SUBDIR += mol2ps SUBDIR += molgif SUBDIR += molscript SUBDIR += molsketch SUBDIR += mpb SUBDIR += mpqc SUBDIR += msms SUBDIR += multiwfn SUBDIR += namd SUBDIR += nest SUBDIR += netcdf SUBDIR += netcdf-cxx SUBDIR += netcdf-fortran SUBDIR += nifticlib SUBDIR += nwchem SUBDIR += nwchem-data SUBDIR += octopus SUBDIR += openbabel SUBDIR += openkim SUBDIR += openmx SUBDIR += opensim-core SUBDIR += opsin SUBDIR += p5-Algorithm-SVMLight SUBDIR += p5-Chemistry-3DBuilder SUBDIR += p5-Chemistry-Bond-Find SUBDIR += p5-Chemistry-Canonicalize SUBDIR += p5-Chemistry-Elements SUBDIR += p5-Chemistry-File-MDLMol SUBDIR += p5-Chemistry-File-Mopac SUBDIR += p5-Chemistry-File-PDB SUBDIR += p5-Chemistry-File-SLN SUBDIR += p5-Chemistry-File-SMARTS SUBDIR += p5-Chemistry-File-SMILES SUBDIR += p5-Chemistry-File-VRML SUBDIR += p5-Chemistry-File-XYZ SUBDIR += p5-Chemistry-FormulaPattern SUBDIR += p5-Chemistry-InternalCoords SUBDIR += p5-Chemistry-Isotope SUBDIR += p5-Chemistry-MacroMol SUBDIR += p5-Chemistry-MidasPattern SUBDIR += p5-Chemistry-Mok SUBDIR += p5-Chemistry-Mol SUBDIR += p5-Chemistry-Pattern SUBDIR += p5-Chemistry-Reaction SUBDIR += p5-Chemistry-Ring SUBDIR += p5-Geo-BUFR SUBDIR += p5-Geo-Coordinates-Converter SUBDIR += p5-Geo-Coordinates-Converter-iArea SUBDIR += p5-Geo-ReadGRIB SUBDIR += p5-Geo-WebService-Elevation-USGS SUBDIR += p5-Mcstas-Tools SUBDIR += p5-PerlMol SUBDIR += p5-Physics-Unit SUBDIR += pagmo2 SUBDIR += paje SUBDIR += paraview SUBDIR += pcmsolver SUBDIR += pnetcdf SUBDIR += psychopy SUBDIR += pulseview SUBDIR += py-DendroPy SUBDIR += py-GPy SUBDIR += py-GPyOpt SUBDIR += py-MDAnalysis SUBDIR += py-MDAnalysisTests SUBDIR += py-OpenFermion SUBDIR += py-PyFR SUBDIR += py-PyQuante SUBDIR += py-ScientificPython SUBDIR += py-SimpleSpectral SUBDIR += py-abipy SUBDIR += py-asdf SUBDIR += py-ase SUBDIR += py-avogadrolibs SUBDIR += py-cdo SUBDIR += py-chempy SUBDIR += py-coards SUBDIR += py-dlib SUBDIR += py-geometer SUBDIR += py-gpaw SUBDIR += py-gsd SUBDIR += py-h5py SUBDIR += py-hcluster SUBDIR += py-kinematics SUBDIR += py-lifelines SUBDIR += py-mdp SUBDIR += py-mlpy SUBDIR += py-mmtf-python SUBDIR += py-molmod SUBDIR += py-netCDF4 SUBDIR += py-obspy SUBDIR += py-oddt SUBDIR += py-openpiv SUBDIR += py-paida SUBDIR += py-paramz SUBDIR += py-phono3py SUBDIR += py-phonopy SUBDIR += py-pupynere SUBDIR += py-pyaixi SUBDIR += py-pydicom SUBDIR += py-pygeodesy SUBDIR += py-pymatgen SUBDIR += py-pymol SUBDIR += py-pyosf SUBDIR += py-pysal SUBDIR += py-pyteomics SUBDIR += py-pyteomics.biolccc SUBDIR += py-qcelemental SUBDIR += py-qcengine SUBDIR += py-qspin SUBDIR += py-quantities SUBDIR += py-rmf SUBDIR += py-rmsd SUBDIR += py-scikit-fuzzy SUBDIR += py-scikit-learn SUBDIR += py-scikit-sparse SUBDIR += py-scimath SUBDIR += py-scipy SUBDIR += py-scoria SUBDIR += py-spglib SUBDIR += py-veusz SUBDIR += py-ws2300 SUBDIR += pybrain SUBDIR += pycdf SUBDIR += pynn SUBDIR += qbox SUBDIR += qcl SUBDIR += qmcpack SUBDIR += quantum-espresso SUBDIR += quantum-espresso-pseudopotentials SUBDIR += qwalk SUBDIR += rdkit SUBDIR += rmf SUBDIR += rubygem-ai4r SUBDIR += rubygem-cdo SUBDIR += rubygem-rgeo SUBDIR += rubygem-rgeo-geojson SUBDIR += rubygem-rgeo-proj4 SUBDIR += rubygem-rgeo-shapefile SUBDIR += rubygem-ruby-dcl SUBDIR += rubygem-ruby-netcdf SUBDIR += scidavis SUBDIR += siesta SUBDIR += sigrok-cli SUBDIR += sigrok-firmware SUBDIR += sigrok-firmware-fx2lafw SUBDIR += sigrok-firmware-utils SUBDIR += silo SUBDIR += simbody + SUBDIR += simgrid SUBDIR += simint SUBDIR += simlib SUBDIR += simsmith SUBDIR += sparta SUBDIR += spglib SUBDIR += step SUBDIR += svmlight SUBDIR += szip SUBDIR += teem SUBDIR += tfel SUBDIR += tinker SUBDIR += udunits SUBDIR += v_sim SUBDIR += vipster SUBDIR += vmd SUBDIR += voro++ SUBDIR += wannier90 SUBDIR += wxmacmolplt SUBDIR += xcrysden SUBDIR += xdrawchem SUBDIR += xfce4-equake-plugin SUBDIR += xmakemol SUBDIR += yoda .include Index: head/science/simgrid/Makefile =================================================================== --- head/science/simgrid/Makefile (nonexistent) +++ head/science/simgrid/Makefile (revision 501792) @@ -0,0 +1,33 @@ +# $FreeBSD$ + +PORTNAME= SimGrid +DISTVERSION= 3.22.2.20190515 +CATEGORIES= science + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Simulator of the behavior of large-scale distributed systems + +LICENSE= LGPL21 +LICENSE_FILE= ${WRKSRC}/LICENSE-LGPL-2.1 + +LIB_DEPENDS= libboost_context.so:devel/boost-libs \ + libcgraph.so:graphics/graphviz \ + libunwind-ptrace.so:devel/libunwind + +USES= cmake:noninja compiler:c++11-lang perl5 python:3.6+ shebangfix +USE_GITLAB= yes +GL_SITE= https://framagit.org/ +GL_ACCOUNT= simgrid +GL_PROJECT= simgrid +GL_COMMIT= 79b7f7a89ad565a17012ee12c9774c1bd9fa508c +SHEBANG_FILES= tools/simgrid_convert_TI_traces.py +USE_LDCONFIG= yes +INSTALL_TARGET= install/strip + +CMAKE_OFF= enable_python + +LDFLAGS+= /usr/lib/liblzma.so # workaround for https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=237919 + +# it'll probably break on gcc-based systems, see https://framagit.org/simgrid/simgrid/issues/12, it'll need CMAKE_OFF=enable_lto and possibly more + +.include Property changes on: head/science/simgrid/Makefile ___________________________________________________________________ Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:keywords ## -0,0 +1 ## +FreeBSD=%H \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/simgrid/distinfo =================================================================== --- head/science/simgrid/distinfo (nonexistent) +++ head/science/simgrid/distinfo (revision 501792) @@ -0,0 +1,3 @@ +TIMESTAMP = 1558020642 +SHA256 (simgrid-simgrid-79b7f7a89ad565a17012ee12c9774c1bd9fa508c_GL0.tar.gz) = 99927ae31d437aa95414ca1a5fd6455c385e4c614a4a4feeeff333f8ad87bc1f +SIZE (simgrid-simgrid-79b7f7a89ad565a17012ee12c9774c1bd9fa508c_GL0.tar.gz) = 4027850 Property changes on: head/science/simgrid/distinfo ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +yes \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/simgrid/files/patch-tools_cmake_Documentation.cmake =================================================================== --- head/science/simgrid/files/patch-tools_cmake_Documentation.cmake (nonexistent) +++ head/science/simgrid/files/patch-tools_cmake_Documentation.cmake (revision 501792) @@ -0,0 +1,8 @@ +--- tools/cmake/Documentation.cmake.orig 2019-05-16 09:00:44 UTC ++++ tools/cmake/Documentation.cmake +@@ -137,4 +137,4 @@ install(FILES + ${CMAKE_HOME_DIRECTORY}/docs/manpages/smpif90.1 + ${CMAKE_HOME_DIRECTORY}/docs/manpages/smpiff.1 + ${CMAKE_HOME_DIRECTORY}/docs/manpages/smpirun.1 +- DESTINATION $ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/share/man/man1) ++ DESTINATION $ENV{DESTDIR}${CMAKE_INSTALL_PREFIX}/man/man1) Property changes on: head/science/simgrid/files/patch-tools_cmake_Documentation.cmake ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +yes \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/simgrid/pkg-descr =================================================================== --- head/science/simgrid/pkg-descr (nonexistent) +++ head/science/simgrid/pkg-descr (revision 501792) @@ -0,0 +1,6 @@ +SimGrid is a scientific instrument to study the behavior of large-scale +distributed systems such as Grids, Clouds, HPC or P2P systems. It can be used to +evaluate heuristics, prototype applications or even assess legacy MPI +applications. All this as a free software. + +WWW: https://simgrid.org/ Property changes on: head/science/simgrid/pkg-descr ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +yes \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/simgrid/pkg-plist =================================================================== --- head/science/simgrid/pkg-plist (nonexistent) +++ head/science/simgrid/pkg-plist (revision 501792) @@ -0,0 +1,127 @@ +bin/graphicator +bin/simgrid-colorizer +bin/simgrid_convert_TI_traces +bin/simgrid_update_xml +bin/smpicc +bin/smpicxx +bin/smpirun +bin/tesh +include/simgrid/Exception.hpp +include/simgrid/actor.h +include/simgrid/barrier.h +include/simgrid/chrono.hpp +include/simgrid/config.h +include/simgrid/engine.h +include/simgrid/forward.h +include/simgrid/host.h +include/simgrid/instr.h +include/simgrid/kernel/future.hpp +include/simgrid/kernel/resource/Action.hpp +include/simgrid/kernel/resource/Model.hpp +include/simgrid/kernel/resource/Resource.hpp +include/simgrid/kernel/routing/ClusterZone.hpp +include/simgrid/kernel/routing/DijkstraZone.hpp +include/simgrid/kernel/routing/DragonflyZone.hpp +include/simgrid/kernel/routing/EmptyZone.hpp +include/simgrid/kernel/routing/FatTreeZone.hpp +include/simgrid/kernel/routing/FloydZone.hpp +include/simgrid/kernel/routing/FullZone.hpp +include/simgrid/kernel/routing/NetPoint.hpp +include/simgrid/kernel/routing/NetZoneImpl.hpp +include/simgrid/kernel/routing/RoutedZone.hpp +include/simgrid/kernel/routing/TorusZone.hpp +include/simgrid/kernel/routing/VivaldiZone.hpp +include/simgrid/link.h +include/simgrid/mailbox.h +include/simgrid/modelchecker.h +include/simgrid/msg.h +include/simgrid/plugins/dvfs.h +include/simgrid/plugins/energy.h +include/simgrid/plugins/file_system.h +include/simgrid/plugins/live_migration.h +include/simgrid/plugins/load.h +include/simgrid/plugins/load_balancer.h +include/simgrid/s4u.hpp +include/simgrid/s4u/Activity.hpp +include/simgrid/s4u/Actor.hpp +include/simgrid/s4u/Barrier.hpp +include/simgrid/s4u/Comm.hpp +include/simgrid/s4u/ConditionVariable.hpp +include/simgrid/s4u/Engine.hpp +include/simgrid/s4u/Exec.hpp +include/simgrid/s4u/Host.hpp +include/simgrid/s4u/Io.hpp +include/simgrid/s4u/Link.hpp +include/simgrid/s4u/Mailbox.hpp +include/simgrid/s4u/Mutex.hpp +include/simgrid/s4u/NetZone.hpp +include/simgrid/s4u/Semaphore.hpp +include/simgrid/s4u/Storage.hpp +include/simgrid/s4u/VirtualMachine.hpp +include/simgrid/semaphore.h +include/simgrid/simdag.h +include/simgrid/simix.h +include/simgrid/simix.hpp +include/simgrid/simix/blocking_simcall.hpp +include/simgrid/smpi/replay.hpp +include/simgrid/storage.h +include/simgrid/vm.h +include/simgrid/zone.h +include/simgrid_config.h +include/smpi/forward.hpp +include/smpi/mpi.h +include/smpi/mpif.h +include/smpi/sampi.h +include/smpi/smpi.h +include/smpi/smpi_extended_traces.h +include/smpi/smpi_extended_traces_fortran.h +include/smpi/smpi_helpers.h +include/smpi/smpi_helpers_internal.h +include/smpi/smpi_main.h +include/xbt.h +include/xbt/Extendable.hpp +include/xbt/RngStream.h +include/xbt/asserts.h +include/xbt/automaton.h +include/xbt/automaton.hpp +include/xbt/backtrace.hpp +include/xbt/base.h +include/xbt/config.h +include/xbt/config.hpp +include/xbt/dict.h +include/xbt/dynar.h +include/xbt/ex.h +include/xbt/file.hpp +include/xbt/function_types.h +include/xbt/functional.hpp +include/xbt/future.hpp +include/xbt/graph.h +include/xbt/log.h +include/xbt/log.hpp +include/xbt/mallocator.h +include/xbt/misc.h +include/xbt/module.h +include/xbt/parmap.h +include/xbt/range.hpp +include/xbt/replay.hpp +include/xbt/signal.hpp +include/xbt/str.h +include/xbt/string.hpp +include/xbt/synchro.h +include/xbt/sysdep.h +include/xbt/system_error.hpp +include/xbt/utility.hpp +include/xbt/virtu.h +include/xbt/xbt_os_time.h +lib/libsimgrid.so +lib/libsimgrid.so.3.22.90 +lib/simgrid/smpimain +lib/simgrid/smpireplaymain +libdata/pkgconfig/simgrid.pc +man/man1/simgrid_update_xml.1.gz +man/man1/smpicc.1.gz +man/man1/smpicxx.1.gz +man/man1/smpif90.1.gz +man/man1/smpiff.1.gz +man/man1/smpirun.1.gz +man/man1/tesh.1.gz Property changes on: head/science/simgrid/pkg-plist ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +yes \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property