Index: head/biology/igv/Makefile
===================================================================
--- head/biology/igv/Makefile	(revision 497785)
+++ head/biology/igv/Makefile	(revision 497786)
@@ -1,53 +1,53 @@
 # $FreeBSD$
 
 PORTNAME=	igv
 DISTVERSIONPREFIX=	v
-DISTVERSION=	2.4.19
+DISTVERSION=	2.5.0
 CATEGORIES=	biology java
 MASTER_SITES=	http://software.broadinstitute.org/software/igv/sites/cancerinformatics.org.igv/files/images/:img
 DISTFILES=	tools.png:img
 DIST_SUBDIR=	${PORTNAME}-${DISTVERSION}
 EXTRACT_ONLY=	${DISTNAME}${EXTRACT_SUFX}
 
 MAINTAINER=	yuri@FreeBSD.org
 COMMENT=	Visualization tool for genomic datasets
 
 LICENSE=	MIT
 LICENSE_FILE=	${WRKSRC}/license.txt
 
 BUILD_DEPENDS=	openjfx8-devel>0:java/openjfx8-devel \
 		gradle4:devel/gradle4
 RUN_DEPENDS=	openjfx8-devel>0:java/openjfx8-devel
 
 USES=		gettext-runtime
 USE_GITHUB=	yes
 GH_ACCOUNT=	igvteam
 USE_JAVA=	yes
 NO_ARCH=	yes
 
 MAKE_ENV+=	GRADLE_USER_HOME=${WRKDIR}
 
 SUB_FILES=	${PORTNAME}.sh
 
 DESKTOP_ENTRIES="IGV" "Integrative Genomics Viewer" "${PREFIX}/share/pixmaps/igv.xpm" "${PORTNAME}" \
 		"Biology;Science;" true
 
 PLIST_FILES=	bin/${PORTNAME} \
 		${JAVAJARDIR}/batik-codec-1.10.jar \
 		${JAVAJARDIR}/goby-io-igv-1.1.jar \
 		${JAVAJARDIR}/log4j-core-2.11.0.jar \
 		${JAVAJARDIR}/${PORTNAME}.jar \
 		share/pixmaps/igv.png
 
 do-build:
 	@cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle4 createDist
 
 do-install:
 	${INSTALL_SCRIPT} ${WRKDIR}/${PORTNAME}.sh ${STAGEDIR}${PREFIX}/bin/${PORTNAME}
 	${INSTALL_DATA} ${WRKSRC}/build/IGV-dist/lib/${PORTNAME}.jar ${STAGEDIR}${JAVAJARDIR}
 	${INSTALL_DATA} ${WRKSRC}/build/IGV-dist/lib/batik-codec-1.10.jar ${STAGEDIR}${JAVAJARDIR}
 	${INSTALL_DATA} ${WRKSRC}/build/IGV-dist/lib/goby-io-igv-1.1.jar ${STAGEDIR}${JAVAJARDIR}
 	${INSTALL_DATA} ${WRKSRC}/build/IGV-dist/lib/log4j-core-2.11.0.jar ${STAGEDIR}${JAVAJARDIR}
 	${INSTALL_DATA} ${DISTDIR}/${DIST_SUBDIR}/tools.png ${STAGEDIR}${PREFIX}/share/pixmaps/${PORTNAME}.png
 
 .include <bsd.port.mk>
Index: head/biology/igv/distinfo
===================================================================
--- head/biology/igv/distinfo	(revision 497785)
+++ head/biology/igv/distinfo	(revision 497786)
@@ -1,5 +1,5 @@
-TIMESTAMP = 1550956856
-SHA256 (igv-2.4.19/tools.png) = 7a619d7770da008d1bc23a60a07f416625ba3a404a3656b8d1bda0de97415d1c
-SIZE (igv-2.4.19/tools.png) = 5139
-SHA256 (igv-2.4.19/igvteam-igv-v2.4.19_GH0.tar.gz) = 194dc530687f66cf1bdf3f9c317d5fbf9344725793e9b9c0f09cb6af70792ced
-SIZE (igv-2.4.19/igvteam-igv-v2.4.19_GH0.tar.gz) = 140831230
+TIMESTAMP = 1554347398
+SHA256 (igv-2.5.0/tools.png) = 7a619d7770da008d1bc23a60a07f416625ba3a404a3656b8d1bda0de97415d1c
+SIZE (igv-2.5.0/tools.png) = 5139
+SHA256 (igv-2.5.0/igvteam-igv-v2.5.0_GH0.tar.gz) = 7b7adb0831d15965d22da76907148cea528eb2fd9812ac2bdf3e0421f447e8e0
+SIZE (igv-2.5.0/igvteam-igv-v2.5.0_GH0.tar.gz) = 140826369