Index: head/biology/ngs-sdk/Makefile
===================================================================
--- head/biology/ngs-sdk/Makefile	(revision 493730)
+++ head/biology/ngs-sdk/Makefile	(revision 493731)
@@ -1,38 +1,38 @@
 # $FreeBSD$
 
 PORTNAME=	ngs
-DISTVERSION=	2.9.3
+DISTVERSION=	2.9.4
 CATEGORIES=	biology
 PKGNAMESUFFIX=	-sdk
 
 MAINTAINER=	yuri@FreeBSD.org
 COMMENT=	Tools and libraries for using data in the INSDC Sequence Read Archives
 
 LICENSE=	PD
 LICENSE_FILE=	${WRKSRC}/LICENSE
 
 BROKEN_aarch64=		fails to configure: unsupported architecture 'FreeBSD'
 
 USES=		gmake perl5
 GNU_CONFIGURE=	yes
 USE_GITHUB=	yes
 GH_ACCOUNT=	ncbi
 ALL_TARGET=	default
 USE_LDCONFIG=	yes
 
 CFLAGS+=	-I${WRKSRC}/ngs-sdk/ngs/unix/${ARCH}/
 
 post-patch:
 	@cd ${WRKSRC}/ngs-sdk/ngs/unix && ${LN} -s x86_64 amd64
 
 do-install:
 	cd ${WRKSRC}/ngs-sdk && ${COPYTREE_SHARE} ngs ${STAGEDIR}/${PREFIX}/include
 	${INSTALL_PROGRAM} ${WRKSRC}/ngs-sdk/${ARCH}-portbld-*/ngs-sdk/FreeBSD/clang/${ARCH}/rel/lib/libngs-sdk.so.${DISTVERSION} ${STAGEDIR}${PREFIX}/lib/
 	cd ${STAGEDIR}${PREFIX}/lib/ && \
 		${LN} -s libngs-sdk.so.${DISTVERSION} libngs-sdk.so.${DISTVERSION:R:R} && \
 		${LN} -s libngs-sdk.so.${DISTVERSION:R:R} libngs-sdk.so
 .for l in libngs-c++.a libngs-adapt-c++.a
 	${INSTALL_LIB} ${WRKSRC}/ngs-sdk/${ARCH}-portbld-*/ngs-sdk/FreeBSD/clang/${ARCH}/rel/lib/${l}.${PORTVERSION} ${STAGEDIR}${PREFIX}/lib/${l}
 .endfor
 
 .include <bsd.port.mk>
Index: head/biology/ngs-sdk/distinfo
===================================================================
--- head/biology/ngs-sdk/distinfo	(revision 493730)
+++ head/biology/ngs-sdk/distinfo	(revision 493731)
@@ -1,3 +1,3 @@
-TIMESTAMP = 1539898469
-SHA256 (ncbi-ngs-2.9.3_GH0.tar.gz) = d16cdf340f4c66e449cc490a222e54e9074cd15fe0938cb75b951a72985f757d
-SIZE (ncbi-ngs-2.9.3_GH0.tar.gz) = 1091640
+TIMESTAMP = 1550958847
+SHA256 (ncbi-ngs-2.9.4_GH0.tar.gz) = 04182f22324a49fa6b4fb7dbc38f718d3c9618dd468a4199fb9570f5ccfa388d
+SIZE (ncbi-ngs-2.9.4_GH0.tar.gz) = 1092165
Index: head/biology/ngs-sdk/pkg-plist
===================================================================
--- head/biology/ngs-sdk/pkg-plist	(revision 493730)
+++ head/biology/ngs-sdk/pkg-plist	(revision 493731)
@@ -1,95 +1,95 @@
 include/ngs/Alignment.hpp
 include/ngs/AlignmentIterator.hpp
 include/ngs/ErrorMsg.hpp
 include/ngs/Fragment.hpp
 include/ngs/FragmentIterator.hpp
 include/ngs/Package.hpp
 include/ngs/Pileup.hpp
 include/ngs/PileupEvent.hpp
 include/ngs/PileupEventIterator.hpp
 include/ngs/PileupIterator.hpp
 include/ngs/Read.hpp
 include/ngs/ReadCollection.hpp
 include/ngs/ReadGroup.hpp
 include/ngs/ReadGroupIterator.hpp
 include/ngs/ReadIterator.hpp
 include/ngs/Reference.hpp
 include/ngs/ReferenceIterator.hpp
 include/ngs/ReferenceSequence.hpp
 include/ngs/Statistics.hpp
 include/ngs/StringRef.hpp
 include/ngs/adapter/AlignmentItf.hpp
 include/ngs/adapter/ErrorMsg.hpp
 include/ngs/adapter/FragmentItf.hpp
 include/ngs/adapter/PileupEventItf.hpp
 include/ngs/adapter/PileupItf.hpp
 include/ngs/adapter/ReadCollectionItf.hpp
 include/ngs/adapter/ReadGroupItf.hpp
 include/ngs/adapter/ReadItf.hpp
 include/ngs/adapter/Refcount.hpp
 include/ngs/adapter/ReferenceItf.hpp
 include/ngs/adapter/ReferenceSequenceItf.hpp
 include/ngs/adapter/StatisticsItf.hpp
 include/ngs/adapter/StringItf.hpp
 include/ngs/adapter/defs.h
 include/ngs/inl/Alignment.hpp
 include/ngs/inl/AlignmentIterator.hpp
 include/ngs/inl/Fragment.hpp
 include/ngs/inl/FragmentIterator.hpp
 include/ngs/inl/Package.hpp
 include/ngs/inl/Pileup.hpp
 include/ngs/inl/PileupEvent.hpp
 include/ngs/inl/PileupEventIterator.hpp
 include/ngs/inl/PileupIterator.hpp
 include/ngs/inl/Read.hpp
 include/ngs/inl/ReadCollection.hpp
 include/ngs/inl/ReadGroup.hpp
 include/ngs/inl/ReadGroupIterator.hpp
 include/ngs/inl/ReadIterator.hpp
 include/ngs/inl/Reference.hpp
 include/ngs/inl/ReferenceIterator.hpp
 include/ngs/inl/ReferenceSequence.hpp
 include/ngs/inl/Statistics.hpp
 include/ngs/inl/StringRef.hpp
 include/ngs/itf/AlignmentItf.h
 include/ngs/itf/AlignmentItf.hpp
 include/ngs/itf/ErrBlock.h
 include/ngs/itf/ErrBlock.hpp
 include/ngs/itf/ErrorMsg.hpp
 include/ngs/itf/FragmentItf.h
 include/ngs/itf/FragmentItf.hpp
 include/ngs/itf/PackageItf.hpp
 include/ngs/itf/PileupEventItf.h
 include/ngs/itf/PileupEventItf.hpp
 include/ngs/itf/PileupItf.h
 include/ngs/itf/PileupItf.hpp
 include/ngs/itf/ReadCollectionItf.h
 include/ngs/itf/ReadCollectionItf.hpp
 include/ngs/itf/ReadGroupItf.h
 include/ngs/itf/ReadGroupItf.hpp
 include/ngs/itf/ReadItf.h
 include/ngs/itf/ReadItf.hpp
 include/ngs/itf/Refcount.h
 include/ngs/itf/Refcount.hpp
 include/ngs/itf/ReferenceItf.h
 include/ngs/itf/ReferenceItf.hpp
 include/ngs/itf/ReferenceSequenceItf.h
 include/ngs/itf/ReferenceSequenceItf.hpp
 include/ngs/itf/StatisticsItf.h
 include/ngs/itf/StatisticsItf.hpp
 include/ngs/itf/StringItf.h
 include/ngs/itf/StringItf.hpp
 include/ngs/itf/VTable.h
 include/ngs/itf/VTable.hpp
 include/ngs/itf/defs.h
 include/ngs/unix/amd64
 include/ngs/unix/fat86/atomic32.h
 include/ngs/unix/i386/atomic32.h
 include/ngs/unix/x86_64/atomic32.h
 include/ngs/win/atomic32.h
 include/ngs/win/stdbool.h
 lib/libngs-adapt-c++.a
 lib/libngs-c++.a
 lib/libngs-sdk.so
 lib/libngs-sdk.so.2
-lib/libngs-sdk.so.2.9.3
+lib/libngs-sdk.so.2.9.4