Index: head/biology/checkm/Makefile
===================================================================
--- head/biology/checkm/Makefile	(revision 492530)
+++ head/biology/checkm/Makefile	(revision 492531)
@@ -1,28 +1,27 @@
 # $FreeBSD$
 
 PORTNAME=	CheckM
 DISTVERSIONPREFIX=	v
-DISTVERSION=	1.0.12
-PORTREVISION=	1
+DISTVERSION=	1.0.13
 CATEGORIES=	biology python
 
 MAINTAINER=	yuri@FreeBSD.org
 COMMENT=	Quality assessment tool for the microbial genomes
 
 LICENSE=	GPLv3
 LICENSE_FILE=	${WRKSRC}/LICENSE
 
 RUN_DEPENDS=	${PYNUMPY} \
 		${PYTHON_PKGNAMEPREFIX}DendroPy>=4.0.0:science/py-DendroPy@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}matplotlib>=1.3.1:math/py-matplotlib@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}pysam>=0.8.3:biology/py-pysam@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}scipy>=0.9.0:science/py-scipy@${PY_FLAVOR}
 
 USES=		python
 USE_GITHUB=	yes
 GH_ACCOUNT=	Ecogenomics
 USE_PYTHON=	distutils noflavors autoplist
 
 NO_ARCH=	yes
 
 .include <bsd.port.mk>
Index: head/biology/checkm/distinfo
===================================================================
--- head/biology/checkm/distinfo	(revision 492530)
+++ head/biology/checkm/distinfo	(revision 492531)
@@ -1,3 +1,3 @@
-TIMESTAMP = 1544141583
-SHA256 (Ecogenomics-CheckM-v1.0.12_GH0.tar.gz) = 4aca26d0ae903ed7567cfc6ec53dc1d2ea909d58a0c4c6e2318a1885abbcfd91
-SIZE (Ecogenomics-CheckM-v1.0.12_GH0.tar.gz) = 211396
+TIMESTAMP = 1549752955
+SHA256 (Ecogenomics-CheckM-v1.0.13_GH0.tar.gz) = 7fe2e86892bcead16f1dda4201ccd8f6371f491be8ecf9ba31bde24157d5fa36
+SIZE (Ecogenomics-CheckM-v1.0.13_GH0.tar.gz) = 211472