Index: head/biology/py-pysam/Makefile =================================================================== --- head/biology/py-pysam/Makefile (revision 475905) +++ head/biology/py-pysam/Makefile (revision 475906) @@ -1,21 +1,18 @@ # $FreeBSD$ PORTNAME= pysam -DISTVERSION= 0.14.1 +DISTVERSION= 0.15.0 CATEGORIES= biology python MASTER_SITES= CHEESESHOP PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Python module for reading, manipulating and writing genomic data sets LICENSE= MIT LICENSE_FILE= ${WRKSRC}/COPYING USES= gmake python USE_PYTHON= autoplist distutils cython cython_run - -post-install: - @${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/pysam/*.so .include Index: head/biology/py-pysam/distinfo =================================================================== --- head/biology/py-pysam/distinfo (revision 475905) +++ head/biology/py-pysam/distinfo (revision 475906) @@ -1,3 +1,3 @@ -TIMESTAMP = 1521619431 -SHA256 (pysam-0.14.1.tar.gz) = 2e86f5228429d08975c8adb9030296699012a8deba8ba26cbfc09b374f792c97 -SIZE (pysam-0.14.1.tar.gz) = 3154603 +TIMESTAMP = 1532978446 +SHA256 (pysam-0.15.0.tar.gz) = 51e7030bebff68502a69fabc601727f827cd6e7c08c5899b11ad8c6084ba4ba5 +SIZE (pysam-0.15.0.tar.gz) = 3223595 Index: head/biology/py-pysam/pkg-descr =================================================================== --- head/biology/py-pysam/pkg-descr (revision 475905) +++ head/biology/py-pysam/pkg-descr (revision 475906) @@ -1,10 +1,10 @@ pysam is a lightweight wrapper of the htslib C-API and provides facilities to read and write SAM/BAM/VCF/BCF/BED/GFF/GTF/FASTA/FASTQ files as well as access to the command line functionality of the samtools and bcftools packages. The module supports compression and random access through indexing. This module provides a low-level wrapper around the htslib C-API as using cython and a high-level API for convenient access to the data within standard genomic file formats. -WWW: https://pypi.org/project/pysam/ +WWW: https://github.com/pysam-developers/pysam