Index: head/biology/p5-BioPerl-Run/Makefile
===================================================================
--- head/biology/p5-BioPerl-Run/Makefile	(revision 429016)
+++ head/biology/p5-BioPerl-Run/Makefile	(revision 429017)
@@ -1,52 +1,52 @@
 # Created by: Mauricio Herrera Cuadra <mauricio@arareko.net>
 # $FreeBSD$
 
 PORTNAME=	BioPerl-Run
-PORTVERSION=	1.007000
+PORTVERSION=	1.007001
 CATEGORIES=	biology perl5
 MASTER_SITES=	CPAN
 MASTER_SITE_SUBDIR=	CPAN:CJFIELDS
 PKGNAMEPREFIX=	p5-
 
 MAINTAINER=	perl@FreeBSD.org
 COMMENT=	Wrapper modules for common bioinformatics tools
 
 LICENSE=	ART10 GPLv1
 LICENSE_COMB=	dual
 LICENSE_FILE_ART10=	${WRKSRC}/LICENSE
 
 BUILD_DEPENDS=	p5-Algorithm-Diff>=0:devel/p5-Algorithm-Diff \
 		p5-BioPerl>=1.007000:biology/p5-BioPerl \
 		p5-Config-Any>=0:devel/p5-Config-Any \
 		p5-File-Sort>=0:misc/p5-File-Sort \
 		p5-IO-String>=0:devel/p5-IO-String \
 		p5-IPC-Run>=0:devel/p5-IPC-Run \
 		p5-XML-Twig>=0:textproc/p5-XML-Twig
 RUN_DEPENDS:=	${BUILD_DEPENDS}
 
 CONFLICTS=	p5-bioperl-run-1.[13579]*
 
 OPTIONS_DEFINE=	DOCS
 
 NO_ARCH=	yes
 USES=		perl5 shebangfix
 USE_PERL5=	modbuild
 SHEBANG_FILES=	scripts/*
 
 PORTDOCS=	*
 
 post-build:
 	(cd ${WRKSRC} && ${PERL} ./Build manifest)
 
 post-install:
 .for i in bioperl_application_installer multi_hmmsearch panalysis papplmaker run_neighbor run_protdist
 	${INSTALL_SCRIPT} ${WRKSRC}/scripts/${i}.PLS ${STAGEDIR}${PREFIX}/bin/bp_${i}
 .endfor
 
 post-install-DOCS-on:
 	@${MKDIR} ${STAGEDIR}${DOCSDIR}
 .for doc in AUTHORS Changes INSTALL.PROGRAMS README.md
 	${INSTALL_DATA} ${WRKSRC}/${doc} ${STAGEDIR}${DOCSDIR}
 .endfor
 
 .include <bsd.port.mk>
Index: head/biology/p5-BioPerl-Run/distinfo
===================================================================
--- head/biology/p5-BioPerl-Run/distinfo	(revision 429016)
+++ head/biology/p5-BioPerl-Run/distinfo	(revision 429017)
@@ -1,3 +1,3 @@
-TIMESTAMP = 1482075945
-SHA256 (BioPerl-Run-1.007000.tar.gz) = 7345ad504301bc156c8bb153be157a5626612fd7af7a3abae0f5be9c6fa635c0
-SIZE (BioPerl-Run-1.007000.tar.gz) = 14548111
+TIMESTAMP = 1482241323
+SHA256 (BioPerl-Run-1.007001.tar.gz) = 55fd632ff24af9b3b1ecf655906cd34c0460a48cb45faabc72dd327ee5e1b0cc
+SIZE (BioPerl-Run-1.007001.tar.gz) = 14548613