Index: head/science/Makefile =================================================================== --- head/science/Makefile (revision 426037) +++ head/science/Makefile (revision 426038) @@ -1,191 +1,192 @@ # $FreeBSD$ # COMMENT = Scientific ports SUBDIR += 2d-rewriter SUBDIR += InsightToolkit SUBDIR += R-cran-AMORE SUBDIR += R-cran-DCluster SUBDIR += R-cran-Epi SUBDIR += R-cran-bayesm SUBDIR += R-cran-cmprsk SUBDIR += R-cran-e1071 SUBDIR += R-cran-eco SUBDIR += R-cran-epicalc SUBDIR += R-cran-etm SUBDIR += R-cran-snow SUBDIR += R-cran-som SUBDIR += afni SUBDIR += avogadro SUBDIR += bddsolve SUBDIR += bft SUBDIR += bodr SUBDIR += brian SUBDIR += buddy SUBDIR += cdcl SUBDIR += cdf SUBDIR += cdo SUBDIR += cgnslib SUBDIR += cgribex SUBDIR += checkmol SUBDIR += chemical-mime-data SUBDIR += chemtool SUBDIR += chemtool-devel SUBDIR += clhep SUBDIR += colt SUBDIR += crf++ SUBDIR += dcl SUBDIR += devisor SUBDIR += dlpoly-classic SUBDIR += ecs SUBDIR += epte SUBDIR += fastcap SUBDIR += fasthenry SUBDIR += fisicalab SUBDIR += fvcom SUBDIR += fvcom-mpi SUBDIR += fvm SUBDIR += gchemutils SUBDIR += getdp SUBDIR += ghemical SUBDIR += ghmm SUBDIR += gnudatalanguage SUBDIR += gramps SUBDIR += grib_api SUBDIR += gromacs SUBDIR += gsmc SUBDIR += gtamsanalyzer SUBDIR += gwyddion SUBDIR += h5utils SUBDIR += harminv SUBDIR += hdf SUBDIR += hdf5 + SUBDIR += hdf5-18 SUBDIR += hs-bio SUBDIR += isaac-cfd SUBDIR += jstrack SUBDIR += kalzium SUBDIR += kst2 SUBDIR += lamprop SUBDIR += libctl SUBDIR += libghemical SUBDIR += libint SUBDIR += libkml SUBDIR += liblinear SUBDIR += liboglappth SUBDIR += libquantum SUBDIR += libsvm SUBDIR += libsvm-python SUBDIR += libxc SUBDIR += linsmith SUBDIR += massxpert SUBDIR += mbdyn SUBDIR += mcstas SUBDIR += mcstas-comps SUBDIR += medit SUBDIR += meep SUBDIR += mei SUBDIR += metaf2xml SUBDIR += minc2 SUBDIR += mol2ps SUBDIR += mpb SUBDIR += mpqc SUBDIR += mpqc-mpich SUBDIR += ncs SUBDIR += netcdf SUBDIR += netcdf-cxx SUBDIR += netcdf-fortran SUBDIR += nifticlib SUBDIR += openbabel SUBDIR += openkim SUBDIR += orthanc SUBDIR += orthanc-dicomweb SUBDIR += orthanc-postgresql SUBDIR += orthanc-webviewer SUBDIR += p5-Algorithm-SVMLight SUBDIR += p5-Chemistry-3DBuilder SUBDIR += p5-Chemistry-Bond-Find SUBDIR += p5-Chemistry-Canonicalize SUBDIR += p5-Chemistry-Elements SUBDIR += p5-Chemistry-File-MDLMol SUBDIR += p5-Chemistry-File-Mopac SUBDIR += p5-Chemistry-File-PDB SUBDIR += p5-Chemistry-File-SLN SUBDIR += p5-Chemistry-File-SMARTS SUBDIR += p5-Chemistry-File-SMILES SUBDIR += p5-Chemistry-File-VRML SUBDIR += p5-Chemistry-File-XYZ SUBDIR += p5-Chemistry-FormulaPattern SUBDIR += p5-Chemistry-InternalCoords SUBDIR += p5-Chemistry-Isotope SUBDIR += p5-Chemistry-MacroMol SUBDIR += p5-Chemistry-MidasPattern SUBDIR += p5-Chemistry-Mok SUBDIR += p5-Chemistry-Mol SUBDIR += p5-Chemistry-Pattern SUBDIR += p5-Chemistry-Reaction SUBDIR += p5-Chemistry-Ring SUBDIR += p5-Geo-BUFR SUBDIR += p5-Geo-Coordinates-Converter SUBDIR += p5-Geo-Coordinates-Converter-iArea SUBDIR += p5-Geo-ReadGRIB SUBDIR += p5-Geo-WebService-Elevation-USGS SUBDIR += p5-Mcstas-Tools SUBDIR += p5-PerlMol SUBDIR += p5-Physics-Unit SUBDIR += paje SUBDIR += paraview SUBDIR += pnetcdf SUBDIR += psychopy SUBDIR += pulseview SUBDIR += py-DendroPy SUBDIR += py-cdo SUBDIR += py-coards SUBDIR += py-h5py SUBDIR += py-hcluster SUBDIR += py-mdp SUBDIR += py-mlpy SUBDIR += py-netCDF4 SUBDIR += py-obspy SUBDIR += py-paida SUBDIR += py-pupynere SUBDIR += py-pyaixi SUBDIR += py-pydicom SUBDIR += py-pysal SUBDIR += py-pyteomics SUBDIR += py-pyteomics.biolccc SUBDIR += py-scikit-fuzzy SUBDIR += py-scikit-learn SUBDIR += py-scikit-sparse SUBDIR += py-scimath SUBDIR += py-scipy SUBDIR += py-ws2300 SUBDIR += pybrain SUBDIR += pycdf SUBDIR += pynn SUBDIR += qcl SUBDIR += qtresistors SUBDIR += rubygem-ai4r SUBDIR += rubygem-cdo SUBDIR += rubygem-ruby-dcl SUBDIR += rubygem-ruby-netcdf SUBDIR += sigrok-cli SUBDIR += sigrok-firmware SUBDIR += sigrok-firmware-fx2lafw SUBDIR += sigrok-firmware-utils SUBDIR += silo SUBDIR += simlib SUBDIR += simsmith SUBDIR += step SUBDIR += svmlight SUBDIR += szip SUBDIR += tfel SUBDIR += udunits SUBDIR += v_sim SUBDIR += veusz SUBDIR += vmd SUBDIR += voro++ SUBDIR += xfce4-equake-plugin SUBDIR += xmakemol .include Index: head/science/hdf5-18/Makefile =================================================================== --- head/science/hdf5-18/Makefile (nonexistent) +++ head/science/hdf5-18/Makefile (revision 426038) @@ -0,0 +1,87 @@ +# Created by: Wen Heping +# $FreeBSD$ + +PORTNAME= hdf5 +PORTVERSION= 1.8.17 +CATEGORIES= science archivers graphics +MASTER_SITES= http://www.hdfgroup.org/ftp/HDF5/current/src/ \ + ftp://ftp.hdfgroup.org/HDF5/current/src/ \ + http://www.hdfgroup.org/ftp/HDF5/releases/${DISTNAME}/src/ \ + ftp://ftp.hdfgroup.org/HDF5/releases/${DISTNAME}/src/ +PKGNAMESUFFIX= -18 + +MAINTAINER= thierry@FreeBSD.org +COMMENT= Hierarchical Data Format library (from NCSA) 1.8 + +LICENSE= BSD4CLAUSE +LICENSE_FILE= ${WRKSRC}/COPYING + +OPTIONS_DEFINE= DEBUG EXAMPLES FORTRAN SZIP + +USES= libtool:keepla tar:bzip2 +USE_LDCONFIG= yes +GNU_CONFIGURE= yes +CONFIGURE_ARGS= --enable-cxx \ + --enable-instrument \ + --enable-strict-format-checks \ + --with-pthread=/usr \ + --with-zlib=/usr \ + --program-suffix=${PKGNAMESUFFIX} \ + --includedir=${PREFIX}/include/${PORTNAME}${PKGNAMESUFFIX} +EXAMPLESDIR= ${PREFIX}/share/examples/${PORTNAME}${PKGNAMESUFFIX} + +.include + +.if ${PORT_OPTIONS:MDEBUG} +CONFIGURE_ARGS+=--disable-production --enable-debug=all +.endif + +.if ${PORT_OPTIONS:MFORTRAN} +USES+= fortran +CONFIGURE_ARGS+=--enable-fortran +CONFIGURE_ENV+= F9X=${FC} +PLIST_SUB+= FORTRAN="" +FCFLAGS_f90= ${FCFLAGS} +LIBS+= -lstdc++ +.else +PLIST_SUB+= FORTRAN="@comment " +.endif + +.if ${PORT_OPTIONS:MSZIP} +LIB_DEPENDS+= libsz.so:science/szip +CONFIGURE_ARGS+=--with-szlib=${LOCALBASE} +.endif + +.include + +.if ${ARCH} == "sparc64" +BROKEN= Does not compile on ${ARCH} +.endif + +pre-configure: + ${REINPLACE_CMD} -e 's|-lpthread|${PTHREAD_LIBS}|g' ${WRKSRC}/configure + ${REINPLACE_CMD} -e 's|-O3||g' ${WRKSRC}/config/gnu-flags + ${REINPLACE_CMD} \ + -e '/LD_LIBRARY_PATH/ s|^|#|' \ + -e 's|/share/hdf5_examples|/${EXAMPLESDIR_REL}|' \ + -e 's|(INSTALL)|(INSTALL_DATA)|' \ + `${FIND} ${WRKSRC} -regex '.*/examples/Makefile.in'` + ${REINPLACE_CMD} -e 's|\[ -a|\[ -f|g' `${FIND} ${WRKSRC} -name \*.sh\*` +.if !${PORT_OPTIONS:MEXAMPLES} + ${REINPLACE_CMD} -e '/^install:/ s|install-examples||' ${WRKSRC}/Makefile.in +.endif + ${FIND} ${WRKSRC} -name Makefile.in | ${XARGS} \ + ${REINPLACE_CMD} -e 's|libhdf5|libhdf5${PKGNAMESUFFIX}|g' + ${REINPLACE_CMD} -e 's|libhdf5|libhdf5${PKGNAMESUFFIX}|g' \ + ${WRKSRC}/test/testlibinfo.sh.in + +post-configure: + ${CP} -p ${WRKSRC}/src/libhdf5.settings.in \ + ${WRKSRC}/src/libhdf5${PKGNAMESUFFIX}.settings.in + ${CP} -p ${WRKSRC}/src/libhdf5.settings \ + ${WRKSRC}/src/libhdf5${PKGNAMESUFFIX}.settings + +regression-test test: build + cd ${WRKSRC}/ && ${SETENV} ${MAKE_ENV} ${MAKE} check + +.include Property changes on: head/science/hdf5-18/Makefile ___________________________________________________________________ Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:keywords ## -0,0 +1 ## +FreeBSD=%H \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/hdf5-18/distinfo =================================================================== --- head/science/hdf5-18/distinfo (nonexistent) +++ head/science/hdf5-18/distinfo (revision 426038) @@ -0,0 +1,3 @@ +TIMESTAMP = 1473971264 +SHA256 (hdf5-1.8.17.tar.bz2) = fc35dd8fd8d398de6b525b27cc111c21fc79795ad6db1b1f12cb15ed1ee8486a +SIZE (hdf5-1.8.17.tar.bz2) = 10030234 Property changes on: head/science/hdf5-18/distinfo ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +on \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/hdf5-18/files/patch-c++_test_Makefile.in =================================================================== --- head/science/hdf5-18/files/patch-c++_test_Makefile.in (nonexistent) +++ head/science/hdf5-18/files/patch-c++_test_Makefile.in (revision 426038) @@ -0,0 +1,12 @@ +--- c++/test/Makefile.in.orig 2016-05-10 21:24:51 UTC ++++ c++/test/Makefile.in +@@ -400,8 +400,7 @@ AMTAR = @AMTAR@ + AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@ + + # Include src, test, and c++/src directories +-AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@ -I$(top_srcdir)/src \ +- -I$(top_srcdir)/test -I$(top_srcdir)/c++/src ++AM_CPPFLAGS = -I$(top_srcdir)/src -I$(top_srcdir)/test -I$(top_srcdir)/c++/src @AM_CPPFLAGS@ @H5_CPPFLAGS@ + AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@ + AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@ + AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ Property changes on: head/science/hdf5-18/files/patch-c++_test_Makefile.in ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +on \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/hdf5-18/files/patch-fortran_src_Makefile.in =================================================================== --- head/science/hdf5-18/files/patch-fortran_src_Makefile.in (nonexistent) +++ head/science/hdf5-18/files/patch-fortran_src_Makefile.in (revision 426038) @@ -0,0 +1,11 @@ +--- fortran/src/Makefile.in.orig 2016-05-10 21:24:52 UTC ++++ fortran/src/Makefile.in +@@ -241,7 +241,7 @@ am__v_FC_1 = + FCLD = $(FC) + FCLINK = $(LIBTOOL) $(AM_V_lt) --tag=FC $(AM_LIBTOOLFLAGS) \ + $(LIBTOOLFLAGS) --mode=link $(FCLD) $(AM_FCFLAGS) $(FCFLAGS) \ +- $(AM_LDFLAGS) $(LDFLAGS) -o $@ ++ $(LDFLAGS) -o $@ + AM_V_FCLD = $(am__v_FCLD_@AM_V@) + am__v_FCLD_ = $(am__v_FCLD_@AM_DEFAULT_V@) + am__v_FCLD_0 = @echo " FCLD " $@; Property changes on: head/science/hdf5-18/files/patch-fortran_src_Makefile.in ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +on \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/hdf5-18/files/patch-fortran_test_Makefile.in =================================================================== --- head/science/hdf5-18/files/patch-fortran_test_Makefile.in (nonexistent) +++ head/science/hdf5-18/files/patch-fortran_test_Makefile.in (revision 426038) @@ -0,0 +1,20 @@ +--- fortran/test/Makefile.in.orig 2016-05-10 21:24:52 UTC ++++ fortran/test/Makefile.in +@@ -150,7 +150,7 @@ fortranlib_test_DEPENDENCIES = libh5test + $(LIBH5F) $(LIBHDF5) + fortranlib_test_LINK = $(LIBTOOL) $(AM_V_lt) --tag=FC \ + $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) --mode=link $(FCLD) \ +- $(fortranlib_test_FCFLAGS) $(FCFLAGS) $(AM_LDFLAGS) $(LDFLAGS) \ ++ $(fortranlib_test_FCFLAGS) $(FCFLAGS) $(LDFLAGS) \ + -o $@ + am_fortranlib_test_1_8_OBJECTS = tH5O.$(OBJEXT) tH5A_1_8.$(OBJEXT) \ + tH5G_1_8.$(OBJEXT) tH5MISC_1_8.$(OBJEXT) tHDF5_1_8.$(OBJEXT) \ +@@ -219,7 +219,7 @@ am__v_FC_1 = + FCLD = $(FC) + FCLINK = $(LIBTOOL) $(AM_V_lt) --tag=FC $(AM_LIBTOOLFLAGS) \ + $(LIBTOOLFLAGS) --mode=link $(FCLD) $(AM_FCFLAGS) $(FCFLAGS) \ +- $(AM_LDFLAGS) $(LDFLAGS) -o $@ ++ $(LDFLAGS) -o $@ + AM_V_FCLD = $(am__v_FCLD_@AM_V@) + am__v_FCLD_ = $(am__v_FCLD_@AM_DEFAULT_V@) + am__v_FCLD_0 = @echo " FCLD " $@; Property changes on: head/science/hdf5-18/files/patch-fortran_test_Makefile.in ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +on \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/hdf5-18/files/patch-hl_c++_test_Makefile.in =================================================================== --- head/science/hdf5-18/files/patch-hl_c++_test_Makefile.in (nonexistent) +++ head/science/hdf5-18/files/patch-hl_c++_test_Makefile.in (revision 426038) @@ -0,0 +1,16 @@ +--- hl/c++/test/Makefile.in.orig 2016-05-10 21:24:53 UTC ++++ hl/c++/test/Makefile.in +@@ -395,10 +395,11 @@ AMTAR = @AMTAR@ + AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@ + + # Include directories +-AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@ -I$(top_srcdir)/src \ ++AM_CPPFLAGS = -I$(top_srcdir)/src \ + -I$(top_srcdir)/c++/src -I$(top_srcdir)/hl/src \ + -I$(top_srcdir)/hl/c++/src -I$(top_srcdir)/test \ +- -I$(top_builddir)/hl/test -I$(top_srcdir)/hl/test ++ -I$(top_builddir)/hl/test -I$(top_srcdir)/hl/test \ ++ @AM_CPPFLAGS@ @H5_CPPFLAGS@ + AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@ + AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@ + AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@ Property changes on: head/science/hdf5-18/files/patch-hl_c++_test_Makefile.in ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +on \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/hdf5-18/files/patch-hl_fortran_test_Makefile.in =================================================================== --- head/science/hdf5-18/files/patch-hl_fortran_test_Makefile.in (nonexistent) +++ head/science/hdf5-18/files/patch-hl_fortran_test_Makefile.in (revision 426038) @@ -0,0 +1,11 @@ +--- hl/fortran/test/Makefile.in.orig 2016-05-10 21:24:53 UTC ++++ hl/fortran/test/Makefile.in +@@ -160,7 +160,7 @@ am__v_FC_1 = + FCLD = $(FC) + FCLINK = $(LIBTOOL) $(AM_V_lt) --tag=FC $(AM_LIBTOOLFLAGS) \ + $(LIBTOOLFLAGS) --mode=link $(FCLD) $(AM_FCFLAGS) $(FCFLAGS) \ +- $(AM_LDFLAGS) $(LDFLAGS) -o $@ ++ $(LDFLAGS) -o $@ + AM_V_FCLD = $(am__v_FCLD_@AM_V@) + am__v_FCLD_ = $(am__v_FCLD_@AM_DEFAULT_V@) + am__v_FCLD_0 = @echo " FCLD " $@; Property changes on: head/science/hdf5-18/files/patch-hl_fortran_test_Makefile.in ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +on \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/hdf5-18/files/patch-src-H5FDdirect.c =================================================================== --- head/science/hdf5-18/files/patch-src-H5FDdirect.c (nonexistent) +++ head/science/hdf5-18/files/patch-src-H5FDdirect.c (revision 426038) @@ -0,0 +1,11 @@ +--- ./src/H5FDdirect.c.orig 2011-11-07 14:11:30.000000000 -0800 ++++ ./src/H5FDdirect.c 2011-12-21 16:50:03.000000000 -0800 +@@ -29,6 +29,8 @@ + * this file. */ + /* #define _XOPEN_SOURCE 600 */ + ++#define O_DIRECT 0x00010000 ++ + #include "H5private.h" /* Generic Functions */ + #include "H5Eprivate.h" /* Error handling */ + #include "H5Fprivate.h" /* File access */ Property changes on: head/science/hdf5-18/files/patch-src-H5FDdirect.c ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +on \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/hdf5-18/files/patch-tools_misc_Makefile.in =================================================================== --- head/science/hdf5-18/files/patch-tools_misc_Makefile.in (nonexistent) +++ head/science/hdf5-18/files/patch-tools_misc_Makefile.in (revision 426038) @@ -0,0 +1,25 @@ +--- tools/misc/Makefile.in.orig 2016-05-10 21:24:56 UTC ++++ tools/misc/Makefile.in +@@ -674,7 +674,7 @@ LIBH5CPP_HL = $(top_builddir)/hl/c++/src + # Scripts used to build examples + # If only shared libraries have been installed, have h5cc build examples with + # shared libraries instead of static libraries +-H5CC = ${DESTDIR}$(bindir)/h5cc ++H5CC = ${DESTDIR}$(bindir)/$(H5CC_NAME) + H5CC_PP = ${DESTDIR}$(bindir)/h5pcc + H5FC = ${DESTDIR}$(bindir)/h5fc + H5FC_PP = ${DESTDIR}$(bindir)/h5pfc +@@ -715,11 +715,11 @@ DISTCLEANFILES = h5cc testh5repart.sh + + # All programs rely on hdf5 library and h5tools library + LDADD = $(LIBH5TOOLS) $(LIBHDF5) +-@BUILD_PARALLEL_CONDITIONAL_FALSE@H5CC_NAME = h5cc ++@BUILD_PARALLEL_CONDITIONAL_FALSE@H5CC_NAME = h5cc-18 + + # h5cc needs custom install and uninstall rules, since it may be + # named h5pcc if hdf5 is being built in parallel mode. +-@BUILD_PARALLEL_CONDITIONAL_TRUE@H5CC_NAME = h5pcc ++@BUILD_PARALLEL_CONDITIONAL_TRUE@H5CC_NAME = h5pcc-18 + + # Automake needs to be taught how to build lib, progs, and tests targets. + # These will be filled in automatically for the most part (e.g., Property changes on: head/science/hdf5-18/files/patch-tools_misc_Makefile.in ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +on \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/hdf5-18/pkg-descr =================================================================== --- head/science/hdf5-18/pkg-descr (nonexistent) +++ head/science/hdf5-18/pkg-descr (revision 426038) @@ -0,0 +1,20 @@ +HDF5 is a completely new Hierarchical Data Format product consisting of a data +format specification and a supporting library implementation. HDF5 is designed +to address some of the limitations of the older HDF product and to address +current and anticipated requirements of modern systems and applications. + +HDF5 includes the following improvements: +- A new file format designed to address some of the deficiencies of HDF4.x, + particularly the need to store larger files and more objects per file. +- A simpler, more comprehensive data model that includes only two basic + structures: a multidimensional array of record structures, and a grouping + structure. +- A simpler, better-engineered library and API, with improved support for + parallel I/O, threads, and other requirements imposed by modern systems + and applications. + +Note: two releases of HDF5 are available. HDF5-1.10 can read files created with +earlier releases, but earlier releases such as HDF5-1.8 may not be able to read +HDF5-1.10 files. If you need the latest, please see the port science/hdf5. + +WWW: http://www.hdfgroup.org/HDF5/ Property changes on: head/science/hdf5-18/pkg-descr ___________________________________________________________________ Added: fbsd:nokeywords ## -0,0 +1 ## +on \ No newline at end of property Added: svn:eol-style ## -0,0 +1 ## +native \ No newline at end of property Added: svn:mime-type ## -0,0 +1 ## +text/plain \ No newline at end of property Index: head/science/hdf5-18/pkg-plist =================================================================== --- head/science/hdf5-18/pkg-plist (nonexistent) +++ head/science/hdf5-18/pkg-plist (revision 426038) @@ -0,0 +1,251 @@ +bin/gif2h5-18 +bin/h52gif-18 +bin/h5c++-18 +bin/h5cc-18 +bin/h5copy-18 +bin/h5debug-18 +bin/h5diff-18 +bin/h5dump-18 +%%FORTRAN%%bin/h5fc +bin/h5import-18 +bin/h5jam-18 +bin/h5ls-18 +bin/h5mkgrp-18 +bin/h5perf_serial-18 +bin/h5redeploy-18 +bin/h5repack-18 +bin/h5repart-18 +bin/h5stat-18 +bin/h5unjam-18 +include/hdf5-18/H5ACpublic.h +include/hdf5-18/H5AbstractDs.h +include/hdf5-18/H5Apublic.h +include/hdf5-18/H5ArrayType.h +include/hdf5-18/H5AtomType.h +include/hdf5-18/H5Attribute.h +include/hdf5-18/H5Classes.h +include/hdf5-18/H5CommonFG.h +include/hdf5-18/H5CompType.h +include/hdf5-18/H5Cpp.h +include/hdf5-18/H5CppDoc.h +include/hdf5-18/H5Cpublic.h +include/hdf5-18/H5DOpublic.h +include/hdf5-18/H5DSpublic.h +include/hdf5-18/H5DataSet.h +include/hdf5-18/H5DataSpace.h +include/hdf5-18/H5DataType.h +include/hdf5-18/H5DcreatProp.h +include/hdf5-18/H5Dpublic.h +include/hdf5-18/H5DxferProp.h +include/hdf5-18/H5EnumType.h +include/hdf5-18/H5Epubgen.h +include/hdf5-18/H5Epublic.h +include/hdf5-18/H5Exception.h +include/hdf5-18/H5FDcore.h +include/hdf5-18/H5FDdirect.h +include/hdf5-18/H5FDfamily.h +include/hdf5-18/H5FDlog.h +include/hdf5-18/H5FDmpi.h +include/hdf5-18/H5FDmpio.h +include/hdf5-18/H5FDmulti.h +include/hdf5-18/H5FDpublic.h +include/hdf5-18/H5FDsec2.h +include/hdf5-18/H5FDstdio.h +include/hdf5-18/H5FaccProp.h +include/hdf5-18/H5FcreatProp.h +include/hdf5-18/H5File.h +include/hdf5-18/H5FloatType.h +include/hdf5-18/H5Fpublic.h +include/hdf5-18/H5Gpublic.h +include/hdf5-18/H5Group.h +include/hdf5-18/H5IMpublic.h +include/hdf5-18/H5IdComponent.h +include/hdf5-18/H5Include.h +include/hdf5-18/H5IntType.h +include/hdf5-18/H5Ipublic.h +include/hdf5-18/H5LTpublic.h +include/hdf5-18/H5Library.h +include/hdf5-18/H5Location.h +include/hdf5-18/H5Lpublic.h +include/hdf5-18/H5MMpublic.h +include/hdf5-18/H5Object.h +include/hdf5-18/H5OcreatProp.h +include/hdf5-18/H5Opublic.h +include/hdf5-18/H5PLextern.h +include/hdf5-18/H5PLpublic.h +include/hdf5-18/H5PTpublic.h +include/hdf5-18/H5PacketTable.h +include/hdf5-18/H5Ppublic.h +include/hdf5-18/H5PredType.h +include/hdf5-18/H5PropList.h +include/hdf5-18/H5Rpublic.h +include/hdf5-18/H5Spublic.h +include/hdf5-18/H5StrType.h +include/hdf5-18/H5TBpublic.h +include/hdf5-18/H5Tpublic.h +include/hdf5-18/H5VarLenType.h +include/hdf5-18/H5Zpublic.h +include/hdf5-18/H5api_adpt.h +%%FORTRAN%%include/hdf5-18/H5f90i.h +%%FORTRAN%%include/hdf5-18/H5f90i_gen.h +include/hdf5-18/H5overflow.h +include/hdf5-18/H5pubconf.h +include/hdf5-18/H5public.h +include/hdf5-18/H5version.h +%%FORTRAN%%include/hdf5-18/h5_dble_interface.mod +%%FORTRAN%%include/hdf5-18/h5a.mod +%%FORTRAN%%include/hdf5-18/h5a_provisional.mod +%%FORTRAN%%include/hdf5-18/h5d.mod +%%FORTRAN%%include/hdf5-18/h5d_provisional.mod +%%FORTRAN%%include/hdf5-18/h5ds.mod +%%FORTRAN%%include/hdf5-18/h5e.mod +%%FORTRAN%%include/hdf5-18/h5e_provisional.mod +%%FORTRAN%%include/hdf5-18/h5f.mod +%%FORTRAN%%include/hdf5-18/h5f_provisional.mod +%%FORTRAN%%include/hdf5-18/h5fortran_types.mod +%%FORTRAN%%include/hdf5-18/h5g.mod +%%FORTRAN%%include/hdf5-18/h5global.mod +%%FORTRAN%%include/hdf5-18/h5i.mod +%%FORTRAN%%include/hdf5-18/h5im.mod +%%FORTRAN%%include/hdf5-18/h5l.mod +%%FORTRAN%%include/hdf5-18/h5l_provisional.mod +%%FORTRAN%%include/hdf5-18/h5lib.mod +%%FORTRAN%%include/hdf5-18/h5lib_provisional.mod +%%FORTRAN%%include/hdf5-18/h5lt.mod +%%FORTRAN%%include/hdf5-18/h5o.mod +%%FORTRAN%%include/hdf5-18/h5o_provisional.mod +%%FORTRAN%%include/hdf5-18/h5p.mod +%%FORTRAN%%include/hdf5-18/h5p_provisional.mod +%%FORTRAN%%include/hdf5-18/h5r.mod +%%FORTRAN%%include/hdf5-18/h5r_provisional.mod +%%FORTRAN%%include/hdf5-18/h5s.mod +%%FORTRAN%%include/hdf5-18/h5t.mod +%%FORTRAN%%include/hdf5-18/h5t_provisional.mod +%%FORTRAN%%include/hdf5-18/h5tb.mod +%%FORTRAN%%include/hdf5-18/h5test_kind_storage_size_mod.mod +%%FORTRAN%%include/hdf5-18/h5z.mod +include/hdf5-18/hdf5.h +%%FORTRAN%%include/hdf5-18/hdf5.mod +include/hdf5-18/hdf5_hl.h +lib/libhdf5-18.a +lib/libhdf5-18.la +lib/libhdf5-18.settings +lib/libhdf5-18.so +lib/libhdf5-18.so.10 +lib/libhdf5-18.so.10.2.0 +lib/libhdf5-18_cpp.a +lib/libhdf5-18_cpp.la +lib/libhdf5-18_cpp.so +lib/libhdf5-18_cpp.so.12 +lib/libhdf5-18_cpp.so.12.0.0 +%%FORTRAN%%lib/libhdf5-18_fortran.a 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