Index: head/math/jags/Makefile =================================================================== --- head/math/jags/Makefile (revision 423203) +++ head/math/jags/Makefile (revision 423204) @@ -1,98 +1,97 @@ # Created by: Eric van Gyzen # $FreeBSD$ PORTNAME= mcmc-jags PORTVERSION= 4.0.0 +PORTREVISION= 1 CATEGORIES= math MASTER_SITES= SF/mcmc-jags/JAGS/${S}.x/Source/:1 \ SF/mcmc-jags/Examples/${S}.x/:2 \ SF/mcmc-jags/Manuals/2.x/:3 \ SF/mcmc-jags/Manuals/${S}.x/:4 DISTFILES= JAGS-${PORTVERSION}${EXTRACT_SUFX}:1 DIST_SUBDIR= ${PORTNAME} EXTRACT_ONLY= ${DISTFILES:M*[12]:C|:.*||} MAINTAINER= ports@FreeBSD.org COMMENT= Just Another Gibbs Sampler LICENSE= GPLv2 GNU_CONFIGURE= yes USES= bison compiler:features fortran gmake libtool localbase USE_GCC= yes USE_LDCONFIG= yes WRKSRC= ${WRKDIR}/JAGS-${PORTVERSION} +OPTIONS_SINGLE= BLAS +OPTIONS_SINGLE_BLAS= ATLAS OPENBLAS NETLIB + +OPTIONS_DEFAULT+= OPENBLAS + +ATLAS_USES= blaslapack:atlas +ATLAS_VARS= MANUAL_PACKAGE_BUILD=\ +"Choose a BLAS option other than ATLAS for package building." +NETLIB_USES= blaslapack:netlib +OPENBLAS_USES= blaslapack:openblas + +CONFIGURE_ARGS+= --with-blas="-L${LOCALBASE}/lib ${BLASLIB}" \ + --with-lapack="${LAPACKLIB}" + +OPTIONS_SUB= YES PLIST_SUB= MODULEVERSION=${S} S= ${PORTVERSION:C|\..*||} OPTIONS_DEFINE= DOCS EXAMPLES .include .if ${PORT_OPTIONS:MDOCS} || make(makesum) DISTFILES+= jags_developer_manual.pdf:3 jags_installation_manual.pdf:4 \ jags_user_manual.pdf:4 PORTDOCS= ${DISTFILES:M*[34]:C|:.*||} .endif .if ${PORT_OPTIONS:MEXAMPLES} || make(makesum) DISTFILES+= classic-bugs.tar.gz:2 PORTEXAMPLES= * -.endif - -.if exists(${LOCALBASE}/lib/libatlas.so) -WITH_BLAS?= atlas -.else -WITH_BLAS?= reference -.endif - -.if ${WITH_BLAS} == "atlas" -LIB_DEPENDS+= libatlas.so:math/atlas -CONFIGURE_ARGS= --with-lapack="-lalapack -lptcblas" --with-blas="-lptf77blas" -.elif ${WITH_BLAS} == "reference" -LIB_DEPENDS+= libblas.so:math/blas -LIB_DEPENDS+= liblapack.so:math/lapack -CONFIGURE_ARGS= --with-lapack="-llapack" --with-blas="-lblas" -.else -IGNORE= invalid value for WITH_BLAS: ${WITH_BLAS} .endif post-patch: @${REINPLACE_CMD} -e 's|[(]libdir[)]/pkgconfig|(prefix)/libdata/pkgconfig|g' \ ${WRKSRC}/etc/Makefile.in @${REINPLACE_CMD} \ -e '/@WINDOWS_FALSE@bin_SCRIPTS =/s/jags/mcmc-&/' \ -e '/CLEANFILES =/s/jags/mcmc-&/' \ -e '/@WINDOWS_FALSE@jags:/s/jags/mcmc-&/' \ -e '/@WINDOWS_FALSE@.*rm -f jags/s/jags/mcmc-&/' \ -e '/@WINDOWS_FALSE@.*mv jags.tmp jags/s/jags/mcmc-&/2' \ ${WRKSRC}/src/terminal/Makefile.in .if ${PORT_OPTIONS:MEXAMPLES} @${SED} -i '' -e '\|JAGS ?=|{s|jags|mcmc-&|;s|/usr/local|${PREFIX}|;}' \ ${WRKDIR}/classic-bugs/vol[12]/Makefile .endif post-install: .if ${PORT_OPTIONS:MDOCS} @${MKDIR} ${STAGEDIR}${DOCSDIR} @cd ${_DISTDIR}; ${INSTALL_DATA} ${PORTDOCS} ${STAGEDIR}${DOCSDIR} .endif .if ${PORT_OPTIONS:MEXAMPLES} @${MKDIR} ${STAGEDIR}${EXAMPLESDIR} @cd ${WRKDIR}/classic-bugs; ${COPYTREE_SHARE} \* ${STAGEDIR}${EXAMPLESDIR} .endif .if defined(MAINTAINER_MODE) BUILD_DEPENDS+= ${LOCALBASE}/lib/R/library/coda/R/coda.rdb:math/R-cran-coda check test: install .for i in 1 2 @cd ${WRKDIR}/classic-bugs/vol${i}; ${SETENV} ${MAKE_ENV} \ ${MAKE_CMD} ${MAKE_ARGS} check .endfor @${FIND} ${WRKDIR}/classic-bugs -type f -name check.log | ${SORT} | \ ${XARGS} -tI @ ${CAT} @ .endif .include