Index: head/biology/fasta3/Makefile =================================================================== --- head/biology/fasta3/Makefile (revision 399467) +++ head/biology/fasta3/Makefile (revision 399468) @@ -1,76 +1,76 @@ # Created by: Johann Visagie # $FreeBSD$ PORTNAME= fasta3 -PORTVERSION= 36.3.7a +PORTVERSION= 36.3.8 CATEGORIES= biology MASTER_SITES= http://faculty.virginia.edu/wrpearson/fasta/fasta36/ DISTNAME= fasta-${PORTVERSION} DIST_SUBDIR= fasta3/2014-01-29 -MAINTAINER= ports@FreeBSD.org +MAINTAINER= wendell@bsd.com.br COMMENT= Collection of programs for searching DNA and protein databases LICENSE= Fasta LICENSE_NAME= Fasta program copyright W. Pearson and U.Virginia LICENSE_FILE= ${WRKSRC}/COPYRIGHT LICENSE_PERMS= dist-mirror dist-sell pkg-mirror pkg-sell auto-accept OPTIONS_DEFINE= DOCS EXAMPLES NO_CDROM= May not be sold or incorporated into a commercial product WRKSRC= ${WRKDIR}/${DISTNAME} BUILD_WRKSRC= ${WRKSRC}/src INSTALL_WRKSRC= ${BUILD_WRKSRC} MAKEFILE= Makefile.freebsd MAKE_ENV= THR_LIBS="-pthread" XDIR="${STAGEDIR}${PREFIX}/bin" \ FASTA_HOST="$$(${UNAME} -n)" SUB_FILES= pkg-message PLIST_SUB= VER="${PORTVERSION:R:R}" MAN1_LINKS= fastf35.1 fasts35.1 fastm35.1 fastx35.1 fasty35.1 \ ggsearch35.1 lalign35.1 ssearch35.1 tfasta35.1 tfastf35.1 \ tfasts35.1 tfastx35.1 tfasty35.1 prfx35.1 prss35.1 MAN1_FILES= fasta36.1 fastf3.1 fasts3.1 prss3.1 map_db.1 ps_lav.1 DOC_FILES= README.versions \ fasta_func.doc readme.* fasta.defaults \ fasta.options fasta_versions.html changes*.html DATA= data/*.mat EXAMPLES= seq/*.aa seq/*.lc seq/*.seq seq/*.lib post-patch: @${CP} ${WRKSRC}/make/${MAKEFILE} ${BUILD_WRKSRC} @${RM} ${WRKSRC}/bin/README post-install: (cd ${WRKSRC}/bin && ${INSTALL_PROGRAM} * ${STAGEDIR}${PREFIX}/bin) (cd ${WRKSRC}/conf && ${INSTALL_DATA} fastlibs \ ${STAGEDIR}${PREFIX}/etc/fastlibs.sample) @${MKDIR} ${STAGEDIR}${DATADIR} .for data in ${DATA} (cd ${WRKSRC} && ${INSTALL_DATA} ${data} ${STAGEDIR}${DATADIR}) .endfor .for manpage in ${MAN1_FILES} (cd ${WRKSRC}/doc && ${INSTALL_MAN} ${manpage} \ ${STAGEDIR}${MAN1PREFIX}/man/man1) .endfor .for links in ${MAN1_LINKS} (${LN} -sf fasta36.1 ${STAGEDIR}${MAN1PREFIX}/man/man1/${links}) .endfor @${MKDIR} ${STAGEDIR}${DOCSDIR} .for i in COPYRIGHT FASTA_LIST README (cd ${WRKSRC} && ${INSTALL_DATA} ${i} ${STAGEDIR}${DOCSDIR}) .endfor .for docfile in ${DOC_FILES} (cd ${WRKSRC}/doc && ${INSTALL_DATA} ${docfile} ${STAGEDIR}${DOCSDIR}) .endfor @${MKDIR} ${STAGEDIR}${EXAMPLESDIR} .for ex in ${EXAMPLES} (cd ${WRKSRC} && ${INSTALL_DATA} ${ex} ${STAGEDIR}${EXAMPLESDIR}) .endfor .include Index: head/biology/fasta3/distinfo =================================================================== --- head/biology/fasta3/distinfo (revision 399467) +++ head/biology/fasta3/distinfo (revision 399468) @@ -1,2 +1,2 @@ -SHA256 (fasta3/2014-01-29/fasta-36.3.7a.tar.gz) = 69d1b8017bb3e4225552686709016405e8f78a3fdf836522c4e57c726f2af87b -SIZE (fasta3/2014-01-29/fasta-36.3.7a.tar.gz) = 1161409 +SHA256 (fasta3/2014-01-29/fasta-36.3.8.tar.gz) = e235458afd16591bbcd5b89b639497e20346841091440a2445593318510a2262 +SIZE (fasta3/2014-01-29/fasta-36.3.8.tar.gz) = 1211304