Index: head/biology/migrate/Makefile =================================================================== --- head/biology/migrate/Makefile (revision 378189) +++ head/biology/migrate/Makefile (revision 378190) @@ -1,62 +1,62 @@ # Created by: Johann Visagie # $FreeBSD$ PORTNAME= migrate -PORTVERSION= 3.6.5 +PORTVERSION= 3.6.6 CATEGORIES= biology MASTER_SITES= http://popgen.sc.fsu.edu/currentversions/ DISTNAME= ${PORTNAME}-${PORTVERSION}.src MAINTAINER= ports@FreeBSD.org COMMENT= Program to estimate population sizes and migration rates GNU_CONFIGURE= yes CONFIGURE_ENV= ac_cv_prog_GMAKE="${MAKE}" MAKE_ARGS= PRETTYCFLAGS="${CFLAGS} -DNOJPEG -DNOZLIB -DNOPNG -Iharu \ -DPRETTY -lstdc++" WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION}/src PLIST_SUB+= PORTNAME=${PORTNAME} PORTDOCS= HISTORY README README_PARALLEL_GENERAL ${PORTNAME}.html PORTEXAMPLES= * # XXX should be converted to OptionsNG .if defined(WITH_THREAD_PRETTY) ALL_TARGET= thread-pretty .elif defined(WITH_PRETTY) ALL_TARGET= pretty .elif defined(WITH_THREAD) ALL_TARGET= thread .else ALL_TARGET= all .endif OPTIONS_DEFINE= DOCS EXAMPLES .include post-patch: @${REINPLACE_CMD} -e 's|="-O "|="$$CFLAGS"|g ; \ s|-lpthread|${PTHREAD_LIBS}|g' ${WRKSRC}/configure @${REINPLACE_CMD} -e '/PRETTY$$/d' ${WRKSRC}/definitions.h @${REINPLACE_CMD} -e 's|-O3||g' ${WRKSRC}/haru/makefile.gcc do-install: ${INSTALL_PROGRAM} ${WRKSRC}/${PORTNAME}-n ${STAGEDIR}${PREFIX}/bin ${LN} -sf ${PORTNAME}-n ${STAGEDIR}${PREFIX}/bin/${PORTNAME} ${INSTALL_MAN} ${WRKSRC}/${PORTNAME}.1 \ ${STAGEDIR}${MAN1PREFIX}/man/man1 ${LN} -sf ${PORTNAME}.1 \ ${STAGEDIR}${MAN1PREFIX}/man/man1/${PORTNAME}-n.1 @${MKDIR} ${STAGEDIR}${DOCSDIR} ${INSTALL_DATA} ${PORTDOCS:S,^,${WRKSRC}/../,} ${STAGEDIR}${DOCSDIR} @${MKDIR} ${STAGEDIR}${DOCSDIR}/graphics ${INSTALL_DATA} ${WRKSRC}/../graphics/* ${STAGEDIR}${DOCSDIR}/graphics @${MKDIR} ${STAGEDIR}${EXAMPLESDIR} ${INSTALL_DATA} ${WRKSRC}/../example/[A-Za-z]* \ ${STAGEDIR}${EXAMPLESDIR} .include Index: head/biology/migrate/distinfo =================================================================== --- head/biology/migrate/distinfo (revision 378189) +++ head/biology/migrate/distinfo (revision 378190) @@ -1,2 +1,2 @@ -SHA256 (migrate-3.6.5.src.tar.gz) = 20d1217d3d61281ecf87324d65703a2cb7ac05fb5565291b8b6856e3d730df58 -SIZE (migrate-3.6.5.src.tar.gz) = 21983586 +SHA256 (migrate-3.6.6.src.tar.gz) = 090b76f7f6a5632f4f16eec81a83f474aafa7ca9cb493e0ca81964d0f363a78d +SIZE (migrate-3.6.6.src.tar.gz) = 23417073 Index: head/biology/migrate/pkg-plist =================================================================== --- head/biology/migrate/pkg-plist (revision 378189) +++ head/biology/migrate/pkg-plist (revision 378190) @@ -1,8 +1,8 @@ bin/%%PORTNAME%% bin/%%PORTNAME%%-n -man/man1/%%PORTNAME%%.1.gz man/man1/%%PORTNAME%%-n.1.gz +man/man1/%%PORTNAME%%.1.gz %%PORTDOCS%%%%DOCSDIR%%/graphics/librarian.gif %%PORTDOCS%%%%DOCSDIR%%/graphics/mail.gif -%%PORTDOCS%%%%DOCSDIR%%/graphics/migrate.gif +%%PORTDOCS%%%%DOCSDIR%%/graphics/%%PORTNAME%%.gif %%PORTDOCS%%%%DOCSDIR%%/graphics/packet.gif