Index: head/biology/ariadne/Makefile =================================================================== --- head/biology/ariadne/Makefile (revision 377622) +++ head/biology/ariadne/Makefile (revision 377623) @@ -1,32 +1,34 @@ # Created by: Fernan Aguero # $FreeBSD$ PORTNAME= ariadne PORTVERSION= 1.3 CATEGORIES= biology MASTER_SITES= http://www.well.ox.ac.uk/ariadne/ MAINTAINER= ports@FreeBSD.org COMMENT= Programs to compare protein sequences and profiles WRKSRC= ${WRKDIR}/SRC-${PORTVERSION} PLIST_FILES+= bin/ariadne bin/prospero USES= gmake tar:Z PORTDOCS= README MAKE_ARGS+= CC="${CC}" OPTIONS_DEFINE= DOCS +MAKE_JOBS_UNSAFE= yes + post-patch: @${REINPLACE_CMD} -e 's|-lpthread|${PTHREAD_LIBS}| ; \ s|CFLAGS =|CFLAGS +=| ; \ s|-c $(OPTIMISE)|-c $(CFLAGS) $(OPTIMIZE)|g' ${WRKSRC}/Makefile do-install: ${INSTALL_PROGRAM} ${WRKSRC}/${OPSYS}/ariadne ${STAGEDIR}${PREFIX}/bin ${INSTALL_PROGRAM} ${WRKSRC}/${OPSYS}/prospero ${STAGEDIR}${PREFIX}/bin @${MKDIR} ${STAGEDIR}${DOCSDIR} ${INSTALL_DATA} ${WRKSRC}/README ${STAGEDIR}${DOCSDIR} .include Index: head/misc/otter/Makefile =================================================================== --- head/misc/otter/Makefile (revision 377622) +++ head/misc/otter/Makefile (revision 377623) @@ -1,44 +1,46 @@ # Created by: Garrett Wollman # $FreeBSD$ PORTNAME= otter PORTVERSION= 3.3f PORTREVISION= 1 CATEGORIES= misc MASTER_SITES= http://www-unix.mcs.anl.gov/AR/otter/dist33/ MAINTAINER= wollman@FreeBSD.org COMMENT= Theorem prover and finite model searcher MAKE_ARGS= CC="${CC}" CFLAGS="${CFLAGS}" PROGRAMS= anldp mace2 otter PORTDOCS= README anldp.pdf mace2.pdf otter33.pdf OPTIONS_DEFINE= DOCS EXAMPLES +MAKE_JOBS_UNSAFE= yes + .include post-patch: # Change "cd foo && $(MAKE)" into "$(MAKE) -C foo" @${REINPLACE_CMD} -E 's,cd (.+) && (\$$\(MAKE\)),\2 -C \1, ; \ s,CC=gcc,,' ${WRKSRC}/Makefile # Add missing depedencies for install targets @${REINPLACE_CMD} -e 's,^install:,& otter,' \ ${WRKSRC}/source/Makefile @${REINPLACE_CMD} -e 's,^install:,& mace2 anldp,' \ ${WRKSRC}/mace2/Makefile do-install: ${INSTALL_PROGRAM} ${PROGRAMS:S,^,${WRKSRC}/bin/,} ${STAGEDIR}${PREFIX}/bin .if ${PORT_OPTIONS:MDOCS} @${MKDIR} ${STAGEDIR}${DOCSDIR} ${INSTALL_DATA} ${PORTDOCS:S,^,${WRKSRC}/documents/,} ${STAGEDIR}${DOCSDIR} .endif .if ${PORT_OPTIONS:MEXAMPLES} @${MKDIR} ${STAGEDIR}${EXAMPLESDIR} ${STAGEDIR}${PREFIX}/share/examples/mace2 (cd ${WRKSRC}/examples; ${PAX} -rw . ${STAGEDIR}${EXAMPLESDIR}) (cd ${WRKSRC}/examples-mace2; ${PAX} -rw . ${STAGEDIR}${PREFIX}/share/examples/mace2) .endif .include