Index: head/biology/plinkseq/Makefile
===================================================================
--- head/biology/plinkseq/Makefile	(revision 362595)
+++ head/biology/plinkseq/Makefile	(revision 362596)
@@ -1,29 +1,30 @@
 # Created by: Jason Bacon <jwbacon@tds.net>
 # $FreeBSD$
 
 PORTNAME=	plinkseq
 PORTVERSION=	0.08
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	biology science
 MASTER_SITES=	http://atgu.mgh.harvard.edu/${PORTNAME}/dist/version-${PORTVERSION}/
 
 MAINTAINER=	jwbacon@tds.net
 COMMENT=	Toolset for working with human genetic variation data
 
 LICENSE=	GPLv2
 
 LIB_DEPENDS=	libprotobuf.so:${PORTSDIR}/devel/protobuf
 
-USES=		dos2unix
+USES=		dos2unix libtool shebangfix
+SHEBANG_FILES=	${WRKSRC}/browser/pbrowse.in ${WRKSRC}/index/index.in
 USE_LDCONFIG=	yes
 GNU_CONFIGURE=	yes
 CONFIGURE_ARGS+=--with-protobuf=${LOCALBASE}
 
 post-patch:
 	${REINPLACE_CMD} -e 's|PF_INET|AF_INET|g' ${WRKSRC}/browser/mongoose.c
 	${REINPLACE_CMD} -e 's|-ldl||g' \
 		${WRKSRC}/browser/Makefile.in \
 		${WRKSRC}/client/Makefile.in \
 		${WRKSRC}/index/Makefile.in
 
 .include <bsd.port.mk>
Index: head/biology/plinkseq/pkg-plist
===================================================================
--- head/biology/plinkseq/pkg-plist	(revision 362595)
+++ head/biology/plinkseq/pkg-plist	(revision 362596)
@@ -1,12 +1,12 @@
 bin/behead
 bin/gcol
 bin/index
 bin/index.cgi
 bin/mongoose
 bin/pbrowse
 bin/pbrowse.cgi
 bin/pseq
 bin/tab2vcf
-lib/libplinkseq.la
 lib/libplinkseq.so
 lib/libplinkseq.so.0
+lib/libplinkseq.so.0.0.0