Index: head/science/Makefile =================================================================== --- head/science/Makefile (revision 191056) +++ head/science/Makefile (revision 191057) @@ -1,105 +1,106 @@ # $FreeBSD$ # COMMENT = Scientific ports SUBDIR += 2dhf SUBDIR += InsightToolkit SUBDIR += abinit SUBDIR += afni SUBDIR += at SUBDIR += bblimage SUBDIR += buddy SUBDIR += cdcl SUBDIR += cdf SUBDIR += cdo SUBDIR += cgnslib SUBDIR += chemtool SUBDIR += chemtool-devel SUBDIR += clhep SUBDIR += crf++ SUBDIR += dcl SUBDIR += devisor SUBDIR += dft++ SUBDIR += elmer-eio SUBDIR += elmer-fem SUBDIR += elmer-hutiter SUBDIR += elmer-matc SUBDIR += elmer-meshgen2d SUBDIR += elmerfront SUBDIR += elmergrid SUBDIR += elmerpost SUBDIR += euler SUBDIR += fastcap SUBDIR += fasthenry SUBDIR += felt SUBDIR += flounder SUBDIR += g3data SUBDIR += gamess SUBDIR += gave SUBDIR += gchempaint SUBDIR += gchemutils SUBDIR += gdis SUBDIR += gerris SUBDIR += getdp SUBDIR += ghemical SUBDIR += ghmm SUBDIR += gnudatalanguage SUBDIR += gramps SUBDIR += gromacs SUBDIR += gsmc SUBDIR += gsystem SUBDIR += gtamsanalyzer SUBDIR += gwyddion SUBDIR += hdf SUBDIR += hdf5 SUBDIR += isaac-cfd SUBDIR += kmovisto SUBDIR += kst SUBDIR += lamprop SUBDIR += libctl SUBDIR += libghemical SUBDIR += libint SUBDIR += libsvm SUBDIR += libsvm-python SUBDIR += linsmith SUBDIR += mayavi SUBDIR += mbdyn SUBDIR += mcstas SUBDIR += medit SUBDIR += minc SUBDIR += minc2 SUBDIR += mpb SUBDIR += mpqc SUBDIR += mpqc-mpich SUBDIR += netcdf + SUBDIR += nifticlib SUBDIR += oases SUBDIR += omnetpp SUBDIR += oof SUBDIR += openbabel SUBDIR += openfoam SUBDIR += ovt SUBDIR += p5-Algorithm-SVMLight SUBDIR += p5-Chemistry-Elements SUBDIR += paje SUBDIR += paraview SUBDIR += pcp SUBDIR += psi3 SUBDIR += py-paida SUBDIR += py-scipy SUBDIR += qcl SUBDIR += ruby-dcl SUBDIR += ruby-gphys SUBDIR += simlib SUBDIR += svmlight SUBDIR += szip SUBDIR += udunits SUBDIR += v_sim SUBDIR += vis5d+ SUBDIR += vmd SUBDIR += x11iraf SUBDIR += xloops-ginac SUBDIR += xmakemol SUBDIR += xmds .include Property changes on: head/science/Makefile ___________________________________________________________________ Modified: cvs2svn:cvs-rev ## -1 +1 ## -1.113 \ No newline at end of property +1.114 \ No newline at end of property Index: head/science/nifticlib/Makefile =================================================================== --- head/science/nifticlib/Makefile (nonexistent) +++ head/science/nifticlib/Makefile (revision 191057) @@ -0,0 +1,27 @@ +# New ports collection makefile for: nifticlib +# Date created: 2007-04-27 +# Whom: Jason W. Bacon +# +# $FreeBSD$ +# + +PORTNAME= nifticlib +PORTVERSION= 0.4 +CATEGORIES= science graphics +MASTER_SITES= ${MASTER_SITE_SOURCEFORGE} +MASTER_SITE_SUBDIR= niftilib + +MAINTAINER= bacon@smithers.neuro.mcw.edu +COMMENT= Neuroimaging Infoirmatics Technology Initiative data format + +USE_GMAKE= yes + +MAN1= nifticlib.1 + +do-install: + ${INSTALL_PROGRAM} ${WRKSRC}/bin/* ${PREFIX}/bin + ${INSTALL_DATA} ${WRKSRC}/lib/* ${PREFIX}/lib + ${INSTALL_DATA} ${WRKSRC}/include/* ${PREFIX}/include + ${INSTALL_MAN} ${FILESDIR}/nifticlib.1 ${PREFIX}/man/man1 + +.include Property changes on: head/science/nifticlib/Makefile ___________________________________________________________________ Added: cvs2svn:cvs-rev ## -0,0 +1 ## +1.1 \ No newline at end of property Added: svn:keywords ## -0,0 +1 ## +FreeBSD=%H \ No newline at end of property Index: head/science/nifticlib/distinfo =================================================================== --- head/science/nifticlib/distinfo (nonexistent) +++ head/science/nifticlib/distinfo (revision 191057) @@ -0,0 +1,3 @@ +MD5 (nifticlib-0.4.tar.gz) = d343dd156dcadab07181427d8b6a4eff +SHA256 (nifticlib-0.4.tar.gz) = 0dbab306fa3b07621f54938bd5f32b80a4a9ea2e665e753adc223ba6c3340ed2 +SIZE (nifticlib-0.4.tar.gz) = 223814 Property changes on: head/science/nifticlib/distinfo ___________________________________________________________________ Added: cvs2svn:cvs-rev ## -0,0 +1 ## +1.1 \ No newline at end of property Added: fbsd:nokeywords ## -0,0 +1 ## +yes \ No newline at end of property Index: head/science/nifticlib/files/nifticlib.1 =================================================================== --- head/science/nifticlib/files/nifticlib.1 (nonexistent) +++ head/science/nifticlib/files/nifticlib.1 (revision 191057) @@ -0,0 +1,21 @@ +.TH NIFTICLIB 1 +.SH NAME \" Section header +.PP + +NIFTICLIB - Neuroimaging Informatics Technology Initiative data format + +.SH "DESCRIPTION" + +.B Nifticlib +is a set of tools and libraries for maintaining a common data format +among neuroimaging applications. For documentation, please visit +http://nifti.nimh.nih.gov/ + +.SH "SEE ALSO" +afni(1), fsl(1), caret(1) + +.SH AUTHOR +.nf +.na +Robert Cox, PhD, et. al. + Property changes on: head/science/nifticlib/files/nifticlib.1 ___________________________________________________________________ Added: cvs2svn:cvs-rev ## -0,0 +1 ## +1.1 \ No newline at end of property Added: fbsd:nokeywords ## -0,0 +1 ## +yes \ No newline at end of property Index: head/science/nifticlib/files/patch-Makefile =================================================================== --- head/science/nifticlib/files/patch-Makefile (nonexistent) +++ head/science/nifticlib/files/patch-Makefile (revision 191057) @@ -0,0 +1,36 @@ +--- Makefile.orig Wed Sep 6 13:12:43 2006 ++++ Makefile Fri Apr 27 09:04:12 2007 +@@ -15,21 +15,21 @@ + + + ## Compiler defines +-cc = gcc +-CC = gcc +-AR = ar +-RANLIB = ranlib +-DEPENDFLAGS = -MM +-GNU_ANSI_FLAGS = -Wall -ansi -pedantic +-ANSI_FLAGS = ${GNU_ANSI_FLAGS} +-CFLAGS = $(ANSI_FLAGS) ++cc ?= gcc ++CC ?= gcc ++AR ?= ar ++RANLIB ?= ranlib ++DEPENDFLAGS ?= -MM ++GNU_ANSI_FLAGS ?= -Wall -ansi -pedantic ++ANSI_FLAGS ?= ${GNU_ANSI_FLAGS} ++CFLAGS ?= $(ANSI_FLAGS) + + ## Command defines + ## gmake does not work on MacOSX or some versions of linux MAKE = gmake +-RM = rm +-MV = mv +-CP = cp +-TAR = /opt/csw/bin/gtar ##/usr/freeware/bin/tar ++RM ?= rm ++MV ?= mv ++CP ?= cp ++TAR ?= /opt/csw/bin/gtar ##/usr/freeware/bin/tar + + + ## Installation Property changes on: head/science/nifticlib/files/patch-Makefile ___________________________________________________________________ Added: cvs2svn:cvs-rev ## -0,0 +1 ## +1.1 \ No newline at end of property Added: fbsd:nokeywords ## -0,0 +1 ## +yes \ No newline at end of property Index: head/science/nifticlib/pkg-descr =================================================================== --- head/science/nifticlib/pkg-descr (nonexistent) +++ head/science/nifticlib/pkg-descr (revision 191057) @@ -0,0 +1,5 @@ +NIfTI-1 is a new Analyze-style data format, proposed by the NIfTI DFWG +as a short-term measure to facilitate inter-operation of functional MRI +data analysis software packages. + +WWW: http://nifti.nimh.nih.gov/ Property changes on: head/science/nifticlib/pkg-descr ___________________________________________________________________ Added: cvs2svn:cvs-rev ## -0,0 +1 ## +1.1 \ No newline at end of property Added: fbsd:nokeywords ## -0,0 +1 ## +yes \ No newline at end of property Index: head/science/nifticlib/pkg-plist =================================================================== --- head/science/nifticlib/pkg-plist (nonexistent) +++ head/science/nifticlib/pkg-plist (revision 191057) @@ -0,0 +1,12 @@ +bin/nifti1_test +bin/nifti_stats +bin/nifti_tool +include/config.h +include/dbh.h +include/fslio.h +include/nifti1.h +include/nifti1_io.h +include/znzlib.h +lib/libfslio.a +lib/libniftiio.a +lib/libznz.a Property changes on: head/science/nifticlib/pkg-plist ___________________________________________________________________ Added: cvs2svn:cvs-rev ## -0,0 +1 ## +1.1 \ No newline at end of property Added: fbsd:nokeywords ## -0,0 +1 ## +yes \ No newline at end of property