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biology/abyss/Makefile
PORTNAME= abyss | PORTNAME= abyss | ||||
DISTVERSION= 2.3.1 | DISTVERSION= 2.3.1 | ||||
CATEGORIES= biology | CATEGORIES= biology | ||||
MAINTAINER= yuri@FreeBSD.org | MAINTAINER= yuri@FreeBSD.org | ||||
COMMENT= Assembly By Short Sequences: parallel, paired-end sequence assembler | COMMENT= Assembly By Short Sequences: parallel, paired-end sequence assembler | ||||
LICENSE= GPLv3 | LICENSE= GPLv3 | ||||
LICENSE_FILE= ${WRKSRC}/LICENSE | LICENSE_FILE= ${WRKSRC}/LICENSE | ||||
BROKEN_i386= result of comparison of constant 18446744073709551615 with expression of type 'size_t', see https://github.com/bcgsc/abyss/issues/310 | BROKEN_i386= result of comparison of constant 18446744073709551615 with expression of type 'size_t', see https://github.com/bcgsc/abyss/issues/310 | ||||
BROKEN_FreeBSD_11= error: use of undeclared identifier 'getline'; did you mean 'std::getline'? | |||||
BUILD_DEPENDS= ${LOCALBASE}/include/boost/version.hpp:devel/boost-libs \ | BUILD_DEPENDS= ${LOCALBASE}/include/boost/version.hpp:devel/boost-libs \ | ||||
ghc:lang/ghc \ | ghc:lang/ghc \ | ||||
pandoc:textproc/hs-pandoc # pandoc is required just for one man page: abyss-sealer | pandoc:textproc/hs-pandoc # pandoc is required just for one man page: abyss-sealer | ||||
LIB_DEPENDS= libffi.so:devel/libffi \ | LIB_DEPENDS= libffi.so:devel/libffi \ | ||||
libgmp.so:math/gmp | libgmp.so:math/gmp | ||||
RUN_DEPENDS= bash:shells/bash \ | RUN_DEPENDS= bash:shells/bash \ | ||||
gmake:devel/gmake | gmake:devel/gmake | ||||
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