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head/biology/trimmomatic/Makefile
| Show All 10 Lines | |||||
| COMMENT= Flexible read trimming tool for Illumina NGS data | COMMENT= Flexible read trimming tool for Illumina NGS data | ||||
| LICENSE= GPLv3 | LICENSE= GPLv3 | ||||
| LICENSE_FILE= ${WRKSRC}/LICENSE | LICENSE_FILE= ${WRKSRC}/LICENSE | ||||
| USES= zip | USES= zip | ||||
| USE_JAVA= yes | USE_JAVA= yes | ||||
| JAVA_VERSION= 1.6+ | |||||
| JAVA_RUN= yes | JAVA_RUN= yes | ||||
| NO_BUILD= yes | NO_BUILD= yes | ||||
| NO_ARCH= yes | NO_ARCH= yes | ||||
| SUB_FILES= trimmomatic | SUB_FILES= trimmomatic | ||||
| do-install: | do-install: | ||||
| ${INSTALL_DATA} ${WRKSRC}/trimmomatic-${PORTVERSION}.jar \ | ${INSTALL_DATA} ${WRKSRC}/trimmomatic-${PORTVERSION}.jar \ | ||||
| ${STAGEDIR}${JAVAJARDIR}/trimmomatic.jar | ${STAGEDIR}${JAVAJARDIR}/trimmomatic.jar | ||||
| cd ${WRKSRC} && ${COPYTREE_SHARE} adapters ${STAGEDIR}${DATADIR} | cd ${WRKSRC} && ${COPYTREE_SHARE} adapters ${STAGEDIR}${DATADIR} | ||||
| ${INSTALL_SCRIPT} ${WRKDIR}/trimmomatic ${STAGEDIR}${PREFIX}/bin | ${INSTALL_SCRIPT} ${WRKDIR}/trimmomatic ${STAGEDIR}${PREFIX}/bin | ||||
| .include <bsd.port.mk> | .include <bsd.port.mk> | ||||