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	# Created by: Scott Cheloha <scottcheloha@gmail.com>
	# $FreeBSD$			# $FreeBSD$

	PORTNAME= bedtools			PORTNAME= bedtools
	PORTVERSION= 2.25.0
	DISTVERSIONPREFIX= v			DISTVERSIONPREFIX= v
				DISTVERSION= 2.27.1
	CATEGORIES= biology			CATEGORIES= biology
	MASTER_SITES= GITHUB

	MAINTAINER= scottcheloha@gmail.com			MAINTAINER= jwb@FreeBSD.org
	COMMENT= Toolset for genome arithmetic			COMMENT= Toolset for genome set arithmetic such as intersect, union

	LICENSE= GPLv2			LICENSE= GPLv2
	LICENSE_FILE= ${WRKSRC}/LICENSE			LICENSE_FILE= ${WRKSRC}/LICENSE

				USES= gmake python
	USE_GITHUB= yes			USE_GITHUB= yes
	GH_ACCOUNT= arq5x			GH_ACCOUNT= arq5x
	GH_PROJECT= bedtools2			GH_PROJECT= bedtools2

	USES= gmake python			pre-build:
	#NO_ARCH= yes			@${REINPLACE_CMD} -e 's\|python\|${PYTHON_CMD}\|g' ${WRKSRC}/Makefile
				@${REINPLACE_CMD} -e 's\|@\$$(CXX)\|$$(CXX)\|g' \
				${WRKSRC}/*/Makefile \
				${WRKSRC}///Makefile \
				${WRKSRC}///*/Makefile \
				${WRKSRC}/////Makefile

	MAKE_JOBS_UNSAFE= yes			post-install:
				${STRIP_CMD} ${STAGEDIR}${PREFIX}/bin/bedtools
	post-patch:
	@${REINPLACE_CMD} -e 's\|python\|${PYTHON_CMD}\|g' \
	${WRKSRC}/Makefile

	.include <bsd.port.mk>			.include <bsd.port.mk>