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head/biology/trimadap/pkg-descr
| Property | Old Value | New Value |
|---|---|---|
| fbsd:nokeywords | null | yes \ No newline at end of property |
| svn:eol-style | null | native \ No newline at end of property |
| svn:mime-type | null | text/plain \ No newline at end of property |
| Trimadap is a small tool to trim adapter sequences from Illumina data. It | |||||
| performs SSE2-SW between each read and each adapter sequence and identifies | |||||
| adapter sequences with a few heuristic rules which can be found in the | |||||
| ta_trim1() function in trimadap-mt.c. The default adapters it uses are included | |||||
| in illumina.txt. These are typical Illumina adapters from paired-end | |||||
| sequencing. | |||||
| WWW: https://github.com/lh3/trimadap | |||||