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science/kst2/files/patch-git_a9d24f9
- This file was added.
| Property | Old Value | New Value |
|---|---|---|
| fbsd:nokeywords | null | yes \ No newline at end of property |
| svn:eol-style | null | native \ No newline at end of property |
| svn:mime-type | null | text/plain \ No newline at end of property |
| Backport of: | |||||
| https://github.com/Kst-plot/kst/commit/a9d24f91057441bbd2e3ed9e7536b071121526cb | |||||
| From a9d24f91057441bbd2e3ed9e7536b071121526cb Mon Sep 17 00:00:00 2001 | |||||
| From: "D. V. Wiebe" <dvw@ketiltrout.net> | |||||
| Date: Thu, 10 Mar 2016 14:09:26 -0800 | |||||
| Subject: [PATCH] GSL-2.x support. | |||||
| --- src/plugins/fits/non_linear.h.orig 2014-02-13 09:41:44 UTC | |||||
| +++ src/plugins/fits/non_linear.h | |||||
| @@ -18,6 +18,7 @@ | |||||
| #include <gsl/gsl_blas.h> | |||||
| #include <gsl/gsl_multifit_nlin.h> | |||||
| #include <gsl/gsl_statistics.h> | |||||
| +#include <gsl/gsl_version.h> | |||||
| #include "common.h" | |||||
| struct data { | |||||
| @@ -100,6 +101,7 @@ bool kstfit_nonlinear( | |||||
| gsl_multifit_function_fdf function; | |||||
| gsl_vector_view vectorViewInitial; | |||||
| gsl_matrix* pMatrixCovariance; | |||||
| + gsl_matrix* pMatrixJacobian; | |||||
| struct data d; | |||||
| double dXInitial[NUM_PARAMS]; | |||||
| double* pInputX; | |||||
| @@ -177,7 +179,16 @@ bool kstfit_nonlinear( | |||||
| } | |||||
| iIterations++; | |||||
| } while( iStatus == GSL_CONTINUE && iIterations < MAX_NUM_ITERATIONS ); | |||||
| - gsl_multifit_covar( pSolver->J, 0.0, pMatrixCovariance ); | |||||
| +#if GSL_MAJOR_VERSION >= 2 | |||||
| + pMatrixJacobian = gsl_matrix_alloc( iLength, NUM_PARAMS ); | |||||
| +#else | |||||
| + pMatrixJacobian = pSolver->J; | |||||
| +#endif | |||||
| + if ( pMatrixJacobian != NULL ) { | |||||
| +#if GSL_MAJOR_VERSION >= 2 | |||||
| + gsl_multifit_fdfsolver_jac( pSolver, pMatrixJacobian ); | |||||
| +#endif | |||||
| + gsl_multifit_covar( pMatrixJacobian, 0.0, pMatrixCovariance ); | |||||
| // | |||||
| // determine the fitted values... | |||||
| @@ -207,7 +218,10 @@ bool kstfit_nonlinear( | |||||
| scalarOutChi->setValue(gsl_blas_dnrm2( pSolver->f )); | |||||
| bReturn = true; | |||||
| - | |||||
| +#if GSL_MAJOR_VERSION >= 2 | |||||
| + gsl_matrix_free( pMatrixJacobian ); | |||||
| +#endif | |||||
| + } | |||||
| gsl_matrix_free( pMatrixCovariance ); | |||||
| } | |||||
| gsl_multifit_fdfsolver_free( pSolver ); | |||||
| --- src/plugins/fits/non_linear_weighted.h.orig 2014-02-13 09:41:44 UTC | |||||
| +++ src/plugins/fits/non_linear_weighted.h | |||||
| @@ -18,6 +18,7 @@ | |||||
| #include <gsl/gsl_blas.h> | |||||
| #include <gsl/gsl_multifit_nlin.h> | |||||
| #include <gsl/gsl_statistics.h> | |||||
| +#include <gsl/gsl_version.h> | |||||
| #include "common.h" | |||||
| struct data { | |||||
| @@ -101,6 +102,7 @@ bool kstfit_nonlinear_weighted( | |||||
| gsl_multifit_function_fdf function; | |||||
| gsl_vector_view vectorViewInitial; | |||||
| gsl_matrix* pMatrixCovariance; | |||||
| + gsl_matrix* pMatrixJacobian; | |||||
| struct data d; | |||||
| double dXInitial[NUM_PARAMS]; | |||||
| double* pInputs[3]; | |||||
| @@ -193,7 +195,17 @@ bool kstfit_nonlinear_weighted( | |||||
| } | |||||
| while( iStatus == GSL_CONTINUE && iIterations < MAX_NUM_ITERATIONS ); | |||||
| - gsl_multifit_covar( pSolver->J, 0.0, pMatrixCovariance ); | |||||
| +#if GSL_MAJOR_VERSION >= 2 | |||||
| + pMatrixJacobian = gsl_matrix_alloc( iLength, NUM_PARAMS ); | |||||
| +#else | |||||
| + pMatrixJacobian = pSolver->J; | |||||
| +#endif | |||||
| + | |||||
| + if ( pMatrixJacobian != NULL ) { | |||||
| +#if GSL_MAJOR_VERSION >= 2 | |||||
| + gsl_multifit_fdfsolver_jac( pSolver, pMatrixJacobian ); | |||||
| +#endif | |||||
| + gsl_multifit_covar( pMatrixJacobian, 0.0, pMatrixCovariance ); | |||||
| // | |||||
| // determine the fitted values... | |||||
| @@ -223,7 +235,10 @@ bool kstfit_nonlinear_weighted( | |||||
| scalarOutChi->setValue(gsl_blas_dnrm2( pSolver->f )); | |||||
| bReturn = true; | |||||
| - | |||||
| +#if GSL_VERSION_MAJOR >= 2 | |||||
| + gsl_matrix_free( pMatrixJacobian ); | |||||
| +#endif | |||||
| + } | |||||
| gsl_matrix_free( pMatrixCovariance ); | |||||
| } | |||||
| gsl_multifit_fdfsolver_free( pSolver ); | |||||