Differential D8186 Diff 23105 biology/cd-hit/Makefile

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biology/cd-hit/Makefile

	# Created by: Jason Bacon <bacon4000@gmail.com>			# Created by: Jason Bacon <bacon4000@gmail.com>
	# $FreeBSD$			# $FreeBSD$

	PORTNAME= cd-hit			PORTNAME= cd-hit
	PORTVERSION= 4.6.4			PORTVERSION= 4.6.6
	PORTREVISION= 1
	DISTVERSIONPREFIX= V			DISTVERSIONPREFIX= V
	CATEGORIES= biology			CATEGORIES= biology

	MAINTAINER= bacon4000@gmail.com			MAINTAINER= bacon4000@gmail.com
	COMMENT= Clustering and comparing protein or nucleotide sequences			COMMENT= Clustering and comparing protein or nucleotide sequences

	LICENSE= GPLv2			LICENSE= GPLv2

	USE_GITHUB= yes			USE_GITHUB= yes
	GH_ACCOUNT= weizhongli			GH_ACCOUNT= weizhongli
	GH_PROJECT= cdhit			GH_PROJECT= cdhit

	USES= compiler:openmp gmake shebangfix			USES= compiler:openmp gmake shebangfix
	WRKSRC= ${WRKDIR}/cdhit-${PORTVERSION}
	SHEBANG_FILES= ${WRKSRC}/*.pl			SHEBANG_FILES= ${WRKSRC}/*.pl
				matUnsubmitted Done Inline Actions This is not needed. mat: This is not needed.

	MAKE_FLAGS= openmp=yes			MAKE_FLAGS= openmp=yes

	post-patch:			post-patch:
	@${REINPLACE_CMD} \			@${REINPLACE_CMD} \
	-e 's\|g++\|${CXX}\|g' \			-e 's\|g++\|${CXX}\|g' \
	-e 's\|\$$(PREFIX)\|$${DESTDIR}$${PREFIX}/bin\|g' \			-e 's\|\$$(PREFIX)\|$${DESTDIR}$${PREFIX}/bin\|g' \
	${WRKSRC}/${MAKEFILE}			${WRKSRC}/${MAKEFILE}
	@${REINPLACE_CMD} \			@${REINPLACE_CMD} \
	-e 's\|/bin/bash\|${LOCALBASE}/bin/bash\|g' \			-e 's\|/bin/bash\|${LOCALBASE}/bin/bash\|g' \
	${WRKSRC}/*.pl			${WRKSRC}/*.pl

	post-install:			post-install:
				matUnsubmitted Done Inline Actions This should be post-install. mat: This should be post-install.
	@cd ${STAGEDIR}${PREFIX}/bin && \			@cd ${STAGEDIR}${PREFIX}/bin && \
	${STRIP_CMD} cd-hit cd-hit-2d cd-hit-454 \			${STRIP_CMD} cd-hit cd-hit-2d cd-hit-454 \
	cd-hit-div cd-hit-est cd-hit-est-2d			cd-hit-div cd-hit-est cd-hit-est-2d

	.include <bsd.port.mk>			.include <bsd.port.mk>