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biology/py-cutadapt/Makefile
| PORTNAME= cutadapt | PORTNAME= cutadapt | ||||
| DISTVERSION= 4.6 | DISTVERSION= 4.6 | ||||
| CATEGORIES= biology python | CATEGORIES= biology python | ||||
| MASTER_SITES= PYPI | MASTER_SITES= PYPI | ||||
| PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} | PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} | ||||
| MAINTAINER= jwb@FreeBSD.org | MAINTAINER= jwb@FreeBSD.org | ||||
| COMMENT= Trim adapters from high-throughput sequencing reads | COMMENT= Trim adapters from high-throughput sequencing reads | ||||
| WWW= https://pypi.org/project/cutadapt/ | WWW= https://pypi.org/project/cutadapt/ | ||||
| LICENSE= MIT | LICENSE= MIT | ||||
| LICENSE_FILE= ${WRKSRC}/LICENSE | LICENSE_FILE= ${WRKSRC}/LICENSE | ||||
| BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}setuptools_scm>0:devel/py-setuptools_scm@${PY_FLAVOR} | BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}setuptools-scm>0:devel/py-setuptools-scm@${PY_FLAVOR} | ||||
| RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}xopen>=1.6.0:archivers/py-xopen@${PY_FLAVOR} \ | RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}xopen>=1.6.0:archivers/py-xopen@${PY_FLAVOR} \ | ||||
| ${PYTHON_PKGNAMEPREFIX}dnaio>=1.2.0:biology/py-dnaio@${PY_FLAVOR} | ${PYTHON_PKGNAMEPREFIX}dnaio>=1.2.0:biology/py-dnaio@${PY_FLAVOR} | ||||
| TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest>0:devel/py-pytest@${PY_FLAVOR} \ | TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest>0:devel/py-pytest@${PY_FLAVOR} \ | ||||
| ${PYTHON_PKGNAMEPREFIX}pytest-timeout>0:devel/py-pytest-timeout@${PY_FLAVOR} \ | ${PYTHON_PKGNAMEPREFIX}pytest-timeout>0:devel/py-pytest-timeout@${PY_FLAVOR} \ | ||||
| ${PYTHON_PKGNAMEPREFIX}pytest-mock>0:devel/py-pytest-mock@${PY_FLAVOR} | ${PYTHON_PKGNAMEPREFIX}pytest-mock>0:devel/py-pytest-mock@${PY_FLAVOR} | ||||
| USES= python | USES= python | ||||
| USE_PYTHON= autoplist concurrent cython distutils | USE_PYTHON= autoplist concurrent cython distutils | ||||
| post-install: | post-install: | ||||
| @${STRIP_CMD} ${STAGEDIR}${PYTHON_SITELIBDIR}/cutadapt/*.so | @${STRIP_CMD} ${STAGEDIR}${PYTHON_SITELIBDIR}/cutadapt/*.so | ||||
| do-test: | do-test: | ||||
| @cd ${WRKSRC} && ${PYTHON_CMD} -m pytest | @cd ${WRKSRC} && ${PYTHON_CMD} -m pytest | ||||
| .include <bsd.port.mk> | .include <bsd.port.mk> | ||||