Changeset View
Changeset View
Standalone View
Standalone View
biology/py-cutadapt/Makefile
PORTNAME= cutadapt | PORTNAME= cutadapt | ||||
DISTVERSION= 4.6 | DISTVERSION= 4.6 | ||||
CATEGORIES= biology python | CATEGORIES= biology python | ||||
MASTER_SITES= PYPI | MASTER_SITES= PYPI | ||||
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} | PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} | ||||
MAINTAINER= jwb@FreeBSD.org | MAINTAINER= jwb@FreeBSD.org | ||||
COMMENT= Trim adapters from high-throughput sequencing reads | COMMENT= Trim adapters from high-throughput sequencing reads | ||||
WWW= https://pypi.org/project/cutadapt/ | WWW= https://pypi.org/project/cutadapt/ | ||||
LICENSE= MIT | LICENSE= MIT | ||||
LICENSE_FILE= ${WRKSRC}/LICENSE | LICENSE_FILE= ${WRKSRC}/LICENSE | ||||
BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}setuptools_scm>0:devel/py-setuptools_scm@${PY_FLAVOR} | BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}setuptools-scm>0:devel/py-setuptools-scm@${PY_FLAVOR} | ||||
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}xopen>=1.6.0:archivers/py-xopen@${PY_FLAVOR} \ | RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}xopen>=1.6.0:archivers/py-xopen@${PY_FLAVOR} \ | ||||
${PYTHON_PKGNAMEPREFIX}dnaio>=1.2.0:biology/py-dnaio@${PY_FLAVOR} | ${PYTHON_PKGNAMEPREFIX}dnaio>=1.2.0:biology/py-dnaio@${PY_FLAVOR} | ||||
TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest>0:devel/py-pytest@${PY_FLAVOR} \ | TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest>0:devel/py-pytest@${PY_FLAVOR} \ | ||||
${PYTHON_PKGNAMEPREFIX}pytest-timeout>0:devel/py-pytest-timeout@${PY_FLAVOR} \ | ${PYTHON_PKGNAMEPREFIX}pytest-timeout>0:devel/py-pytest-timeout@${PY_FLAVOR} \ | ||||
${PYTHON_PKGNAMEPREFIX}pytest-mock>0:devel/py-pytest-mock@${PY_FLAVOR} | ${PYTHON_PKGNAMEPREFIX}pytest-mock>0:devel/py-pytest-mock@${PY_FLAVOR} | ||||
USES= python | USES= python | ||||
USE_PYTHON= autoplist concurrent cython distutils | USE_PYTHON= autoplist concurrent cython distutils | ||||
post-install: | post-install: | ||||
@${STRIP_CMD} ${STAGEDIR}${PYTHON_SITELIBDIR}/cutadapt/*.so | @${STRIP_CMD} ${STAGEDIR}${PYTHON_SITELIBDIR}/cutadapt/*.so | ||||
do-test: | do-test: | ||||
@cd ${WRKSRC} && ${PYTHON_CMD} -m pytest | @cd ${WRKSRC} && ${PYTHON_CMD} -m pytest | ||||
.include <bsd.port.mk> | .include <bsd.port.mk> |