diff --git a/biology/btllib/Makefile b/biology/btllib/Makefile index 14d9616c5a00..9761e443973c 100644 --- a/biology/btllib/Makefile +++ b/biology/btllib/Makefile @@ -1,30 +1,30 @@ PORTNAME= btllib DISTVERSIONPREFIX= v -DISTVERSION= 1.6.2 +DISTVERSION= 1.7.0 CATEGORIES= biology devel MAINTAINER= yuri@FreeBSD.org COMMENT= Bioinformatics Technology Lab common code library WWW= https://github.com/bcgsc/btllib LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE BUILD_DEPENDS= bash:shells/bash \ samtools:biology/samtools \ cmake:devel/cmake-core LIB_DEPENDS= libsdsl.so:devel/sdsl-lite RUN_DEPENDS= samtools:biology/samtools USES= meson pkgconfig python:build shebangfix SHEBANG_FILES= scripts/* USE_GITHUB= yes GH_ACCOUNT= bcgsc GH_TUPLE= p-ranav:argparse:15d745f:argparse/subprojects/argparse \ skystrife:cpptoml:fededad:cpptoml/subprojects/cpptoml BINARY_ALIAS= python3=${PYTHON_CMD} # python3-config=${PYTHON_CMD}-config # installs python binding into a wrong location, see https://github.com/bcgsc/btllib/issues/111 .include diff --git a/biology/btllib/distinfo b/biology/btllib/distinfo index 4e0da820e3fc..a55bb66803df 100644 --- a/biology/btllib/distinfo +++ b/biology/btllib/distinfo @@ -1,7 +1,7 @@ -TIMESTAMP = 1689975725 -SHA256 (bcgsc-btllib-v1.6.2_GH0.tar.gz) = cba796cb83791e8524f5108459892a1131748cda55189c9acea21d4bdb80e7a0 -SIZE (bcgsc-btllib-v1.6.2_GH0.tar.gz) = 848942 +TIMESTAMP = 1702442278 +SHA256 (bcgsc-btllib-v1.7.0_GH0.tar.gz) = ad8f26cf6187a000fe6cc7a61fa625567f029bca9bb0271d695347627a014059 +SIZE (bcgsc-btllib-v1.7.0_GH0.tar.gz) = 847032 SHA256 (p-ranav-argparse-15d745f_GH0.tar.gz) = f033d4eb4a430b4ae4bf3c2a40e087709bf77462c1f9968ae07828437219a370 SIZE (p-ranav-argparse-15d745f_GH0.tar.gz) = 105608 SHA256 (skystrife-cpptoml-fededad_GH0.tar.gz) = dd2d129b67f537ae7d6f8d8d084c8c0d772d0f5b4b3118c1892e67ff536e335e SIZE (skystrife-cpptoml-fededad_GH0.tar.gz) = 47398 diff --git a/biology/btllib/pkg-plist b/biology/btllib/pkg-plist index ccb8f845f30f..c3beeb0f5b9e 100644 --- a/biology/btllib/pkg-plist +++ b/biology/btllib/pkg-plist @@ -1,32 +1,32 @@ bin/indexlr bin/mi_bf_generate bin/randseq include/btllib/aahash.hpp -include/btllib/aahash_consts.hpp include/btllib/bloom_filter.hpp include/btllib/counting_bloom_filter-inl.hpp include/btllib/counting_bloom_filter.hpp include/btllib/cpptoml.h include/btllib/cstring.hpp include/btllib/data_stream.hpp include/btllib/graph.hpp +include/btllib/hashing_internals.hpp include/btllib/indexlr.hpp include/btllib/mi_bloom_filter-inl.hpp include/btllib/mi_bloom_filter.hpp include/btllib/nthash.hpp -include/btllib/nthash_consts.hpp -include/btllib/nthash_lowlevel.hpp +include/btllib/nthash_kmer.hpp +include/btllib/nthash_seed.hpp include/btllib/order_queue.hpp include/btllib/process_pipeline.hpp include/btllib/randseq.hpp include/btllib/seq.hpp include/btllib/seq_reader.hpp include/btllib/seq_reader_fasta_module.hpp include/btllib/seq_reader_fastq_module.hpp include/btllib/seq_reader_multiline_fasta_module.hpp include/btllib/seq_reader_multiline_fastq_module.hpp include/btllib/seq_reader_sam_module.hpp include/btllib/seq_writer.hpp include/btllib/status.hpp include/btllib/util.hpp lib/libbtllib.so