diff --git a/biology/viennarna/Makefile b/biology/viennarna/Makefile index fbf0bae747ed..57f2ace011ad 100644 --- a/biology/viennarna/Makefile +++ b/biology/viennarna/Makefile @@ -1,50 +1,49 @@ PORTNAME= viennarna -DISTVERSION= 2.6.2 -PORTREVISION= 1 +DISTVERSION= 2.6.3 CATEGORIES= biology MASTER_SITES= https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_6_x/ DISTNAME= ViennaRNA-${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= Alignment tools for the structural analysis of RNA WWW= https://www.tbi.univie.ac.at/RNA/ LICENSE= ViennaRNALicense LICENSE_NAME= Vienna RNA License LICENSE_FILE= ${WRKSRC}/COPYING LICENSE_PERMS= auto-accept dist-mirror pkg-mirror BUILD_DEPENDS= bash:shells/bash \ libgd>0:graphics/gd # for the static lib LIB_DEPENDS= libgmp.so:math/gmp \ libgsl.so:math/gsl \ liblapack.so:math/lapack \ libmpfr.so:math/mpfr \ libopenblas.so:math/openblas USES= autoreconf compiler:c++11-lang fortran gmake libtool localbase perl5 pkgconfig xorg # w/out autoreconf -lstdc++ is present in configure and Makefiles and this causes link failure USE_XORG= x11 xext # only for build GNU_CONFIGURE= yes CONFIGURE_SHELL= ${PREFIX}/bin/bash CONFIGURE_ARGS= --enable-shared --disable-static --with-gsl --with-cluster --with-kinwalker --enable-mpfr --without-python --without-python3 --without-perl TEST_TARGET= check CONFLICTS_INSTALL= g2 # include/g2.h INFO= RNAlib DATASDIR= ${PREFIX}/share/ViennaRNA DOCSDIR= ${PREFIX}/share/doc/ViennaRNA EXAMPLESDIR= ${PREFIX}/share/examples/ViennaRNA OPTIONS_DEFINE= DOCS EXAMPLES PORTDOCS= * PORTEXAMPLES= * post-configure: # remove -lstdc++ from .pc file @${REINPLACE_CMD} -e 's| -lstdc++||' ${WRKSRC}/RNAlib2.pc .include diff --git a/biology/viennarna/distinfo b/biology/viennarna/distinfo index 0c7dcfe112a6..25276d5df560 100644 --- a/biology/viennarna/distinfo +++ b/biology/viennarna/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1689538729 -SHA256 (ViennaRNA-2.6.2.tar.gz) = 2ce1f69f4ff87e90f50e8de704e33db7818c7d2f0dfb427a08e0eafc9da9b627 -SIZE (ViennaRNA-2.6.2.tar.gz) = 62105677 +TIMESTAMP = 1690013390 +SHA256 (ViennaRNA-2.6.3.tar.gz) = 07b5c3abcda3076f3dd2041a67df5aa25d21468ae41f18eaecf3aaa7751ab495 +SIZE (ViennaRNA-2.6.3.tar.gz) = 66320039