diff --git a/biology/seqkit/Makefile b/biology/seqkit/Makefile index f64ae1af9267..3b370c32bded 100644 --- a/biology/seqkit/Makefile +++ b/biology/seqkit/Makefile @@ -1,24 +1,31 @@ PORTNAME= seqkit DISTVERSIONPREFIX= v DISTVERSION= 2.4.0 +PORTREVISION= 1 CATEGORIES= biology MAINTAINER= yuri@FreeBSD.org COMMENT= Cross-platform and ultrafast toolkit for FASTA/Q file manipulation WWW= https://bioinf.shenwei.me/seqkit/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE USES= go:modules +USE_GITHUB= nodefault +GH_TUPLE= golang:sys:v0.6.0:sys GO_MODULE= github.com/shenwei356/seqkit/v2 GO_TARGET= ./${PORTNAME} PLIST_FILES= bin/${PORTNAME} +pre-patch: + ${RM} -r ${WRKSRC}/vendor/golang.org/x/sys + ${LN} -s ${WRKDIR}/sys-* ${WRKSRC}/vendor/golang.org/x/sys + do-test: # from https://bioinf.shenwei.me/seqkit/benchmark/ @cd ${WRKSRC}/tests && \ ${GO_WRKDIR_BIN}/seqkit stat *.fa .include diff --git a/biology/seqkit/distinfo b/biology/seqkit/distinfo index 75736a5f4b6e..3c8be3fd3563 100644 --- a/biology/seqkit/distinfo +++ b/biology/seqkit/distinfo @@ -1,5 +1,7 @@ -TIMESTAMP = 1679088879 +TIMESTAMP = 1679152309 SHA256 (go/biology_seqkit/seqkit-v2.4.0/v2.4.0.mod) = b2e9bfdf3899c8c4f9a736e0a18599ec36784db188fbce8c4dc1e578a7bfe2f8 SIZE (go/biology_seqkit/seqkit-v2.4.0/v2.4.0.mod) = 2391 SHA256 (go/biology_seqkit/seqkit-v2.4.0/v2.4.0.zip) = 31ac20c6354ff852b9cc3c5506e48154cbe76605e3f8961a7043f76533cee231 SIZE (go/biology_seqkit/seqkit-v2.4.0/v2.4.0.zip) = 33905729 +SHA256 (go/biology_seqkit/seqkit-v2.4.0/golang-sys-v0.6.0_GH0.tar.gz) = b4f6d17c7a128f76169964b437cb66b3f2dbf9a33361928ec19dfecf7b03fc54 +SIZE (go/biology_seqkit/seqkit-v2.4.0/golang-sys-v0.6.0_GH0.tar.gz) = 1434234