diff --git a/biology/biolibc-tools/Makefile b/biology/biolibc-tools/Makefile index 4a63e3749e93..7cf0341514eb 100644 --- a/biology/biolibc-tools/Makefile +++ b/biology/biolibc-tools/Makefile @@ -1,27 +1,28 @@ # Created by: J. Bacon PORTNAME= biolibc-tools -DISTVERSION= 0.1.1 +DISTVERSION= 0.1.2 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org COMMENT= High-performance bioinformatics tools based on biolibc LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE BUILD_DEPENDS= uthash>0:devel/uthash LIB_DEPENDS= libbiolibc.so:biology/biolibc \ + libxtend.so:devel/libxtend \ libxxhash.so:devel/xxhash USE_GITHUB= yes GH_ACCOUNT= auerlab MAKE_ENV= VERSION=${PORTVERSION} INSTALL_TARGET= install-strip pre-build: (cd ${WRKSRC} && ${MAKE} LOCALBASE=${LOCALBASE} depend) .include diff --git a/biology/biolibc-tools/distinfo b/biology/biolibc-tools/distinfo index d3732ec6c333..e513f059cd26 100644 --- a/biology/biolibc-tools/distinfo +++ b/biology/biolibc-tools/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1639495090 -SHA256 (auerlab-biolibc-tools-0.1.1_GH0.tar.gz) = 169ea4bbd70049d9e364e145db0ca4793da99202f12262e00485407cfbd2997b -SIZE (auerlab-biolibc-tools-0.1.1_GH0.tar.gz) = 21700 +TIMESTAMP = 1647347831 +SHA256 (auerlab-biolibc-tools-0.1.2_GH0.tar.gz) = 817b3f88b1d83a28389dbbb43ef1e0d2c1fb3b7e72ca7151fa26a35058ef4558 +SIZE (auerlab-biolibc-tools-0.1.2_GH0.tar.gz) = 24610 diff --git a/biology/biolibc-tools/pkg-plist b/biology/biolibc-tools/pkg-plist index f5fe188a60a8..b82ed3ef61dc 100644 --- a/biology/biolibc-tools/pkg-plist +++ b/biology/biolibc-tools/pkg-plist @@ -1,21 +1,25 @@ bin/blt libexec/biolibc-tools/chrom-lens +libexec/biolibc-tools/ensemblid2gene libexec/biolibc-tools/extract-seq libexec/biolibc-tools/fasta2seq libexec/biolibc-tools/fastq-derep.sh libexec/biolibc-tools/fastx-derep +libexec/biolibc-tools/fastx-stats libexec/biolibc-tools/fastx2tsv libexec/biolibc-tools/find-orfs libexec/biolibc-tools/gff2bed libexec/biolibc-tools/uniq-seqs.awk libexec/biolibc-tools/vcf-search man/man1/blt-chrom-lens.1.gz +man/man1/blt-ensemblid2gene.1.gz man/man1/blt-extract-seq.1.gz man/man1/blt-fasta2seq.1.gz man/man1/blt-fastq-derep.sh.1.gz man/man1/blt-fastx-derep.1.gz +man/man1/blt-fastx-stats.1.gz man/man1/blt-fastx2tsv.1.gz man/man1/blt-find-orfs.1.gz man/man1/blt-gff2bed.1.gz man/man1/blt-vcf-search.1.gz man/man1/blt.1.gz