diff --git a/biology/Makefile b/biology/Makefile
index d24068a96660..7f4804d2445d 100644
--- a/biology/Makefile
+++ b/biology/Makefile
@@ -1,112 +1,112 @@
 # $FreeBSD$
 #
 
     COMMENT = Biology
 
     SUBDIR += ariadne
     SUBDIR += artemis
     SUBDIR += avida
     SUBDIR += babel
     SUBDIR += bcftools
     SUBDIR += bedtools
     SUBDIR += biococoa
     SUBDIR += biojava
     SUBDIR += blat
     SUBDIR += bowtie
     SUBDIR += bowtie2
     SUBDIR += bwa
     SUBDIR += cd-hit
     SUBDIR += cdbfasta
     SUBDIR += chemeq
     SUBDIR += clustalw
     SUBDIR += consed
     SUBDIR += crux
     SUBDIR += diamond
     SUBDIR += emboss
     SUBDIR += fasta
     SUBDIR += fasta3
     SUBDIR += fastdnaml
     SUBDIR += fastool
     SUBDIR += fasttree
     SUBDIR += fastx-toolkit
     SUBDIR += fluctuate
     SUBDIR += garlic
     SUBDIR += gff2ps
     SUBDIR += gmap
     SUBDIR += gperiodic
     SUBDIR += grappa
     SUBDIR += hmmer
     SUBDIR += htslib
     SUBDIR += iolib
     SUBDIR += jalview
     SUBDIR += jellyfish
     SUBDIR += lagan
     SUBDIR += lamarc
     SUBDIR += libgtextutils
     SUBDIR += libsbml
     SUBDIR += linux-foldingathome
     SUBDIR += mafft
     SUBDIR += mapm3
     SUBDIR += migrate
     SUBDIR += molden
     SUBDIR += mopac
     SUBDIR += mrbayes
     SUBDIR += mummer
     SUBDIR += muscle
     SUBDIR += ncbi-blast+
     SUBDIR += ncbi-toolkit
     SUBDIR += njplot
     SUBDIR += p5-AcePerl
     SUBDIR += p5-Bio-ASN1-EntrezGene
     SUBDIR += p5-Bio-Das
     SUBDIR += p5-Bio-Das-Lite
     SUBDIR += p5-Bio-GFF3
     SUBDIR += p5-Bio-Glite
     SUBDIR += p5-Bio-Graphics
     SUBDIR += p5-Bio-MAGETAB
     SUBDIR += p5-Bio-NEXUS
     SUBDIR += p5-Bio-Phylo
     SUBDIR += p5-Bio-SCF
     SUBDIR += p5-BioPerl
-    SUBDIR += p5-bioperl-run
+    SUBDIR += p5-BioPerl-Run
     SUBDIR += p5-transdecoder
     SUBDIR += paml
     SUBDIR += phrap
     SUBDIR += phred
     SUBDIR += phylip
     SUBDIR += phyml
     SUBDIR += plink
     SUBDIR += plinkseq
     SUBDIR += primer3
     SUBDIR += protomol
     SUBDIR += psi88
     SUBDIR += py-biom-format
     SUBDIR += py-biopython
     SUBDIR += pycogent
     SUBDIR += pyfasta
     SUBDIR += python-nexus
     SUBDIR += recombine
     SUBDIR += ruby-bio
     SUBDIR += samtools
     SUBDIR += seaview
     SUBDIR += seqan
     SUBDIR += seqan-apps
     SUBDIR += seqan1
     SUBDIR += seqio
     SUBDIR += seqtools
     SUBDIR += sim4
     SUBDIR += slclust
     SUBDIR += ssaha
     SUBDIR += tRNAscan-SE
     SUBDIR += t_coffee
     SUBDIR += tinker
     SUBDIR += treepuzzle
     SUBDIR += treeviewx
     SUBDIR += trimmomatic
     SUBDIR += ugene
     SUBDIR += vcftools
     SUBDIR += velvet
     SUBDIR += wise
     SUBDIR += xmolwt
 
 .include <bsd.port.subdir.mk>
diff --git a/biology/p5-bioperl-run/Makefile b/biology/p5-BioPerl-Run/Makefile
similarity index 79%
rename from biology/p5-bioperl-run/Makefile
rename to biology/p5-BioPerl-Run/Makefile
index 134d8e50d0d1..881c35fd26d5 100644
--- a/biology/p5-bioperl-run/Makefile
+++ b/biology/p5-BioPerl-Run/Makefile
@@ -1,48 +1,50 @@
 # Created by: Mauricio Herrera Cuadra <mauricio@arareko.net>
 # $FreeBSD$
 
-PORTNAME=	bioperl-run
+PORTNAME=	BioPerl-Run
 PORTVERSION=	1.6.901
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	biology perl5
 PKGNAMEPREFIX=	p5-
 
 MAINTAINER=	perl@FreeBSD.org
 COMMENT=	Wrapper modules for common bioinformatics tools
 
 LICENSE=	ART10 GPLv3
 LICENSE_COMB=	dual
 
-BUILD_DEPENDS=	p5-bioperl>=1.6.0:biology/p5-bioperl \
-		p5-IPC-Run>=0:devel/p5-IPC-Run \
-		p5-Algorithm-Diff>=0:devel/p5-Algorithm-Diff \
-		p5-XML-Twig>=0:textproc/p5-XML-Twig \
+BUILD_DEPENDS=	p5-Algorithm-Diff>=0:devel/p5-Algorithm-Diff \
+		p5-BioPerl>=1.6.0:biology/p5-BioPerl \
+		p5-Config-Any>=0:devel/p5-Config-Any \
 		p5-File-Sort>=0:misc/p5-File-Sort \
-		p5-Config-Any>=0:devel/p5-Config-Any
+		p5-IPC-Run>=0:devel/p5-IPC-Run \
+		p5-XML-Twig>=0:textproc/p5-XML-Twig
 RUN_DEPENDS:=	${BUILD_DEPENDS}
 
 CONFLICTS=	p5-bioperl-run-1.[13579]*
 
 USE_GITHUB=	yes
 GH_ACCOUNT=	bioperl
+GH_PROJECT=	bioperl-run
 GH_TAGNAME=	96ccd93
 
+NO_ARCH=	yes
 USES=		perl5 shebangfix
 USE_PERL5=	modbuild
 SHEBANG_FILES=	scripts/*
 
 OPTIONS_DEFINE=	DOCS
 
 post-build:
 	(cd ${WRKSRC} && ${PERL} ./Build manifest)
 
 post-install:
 .for i in bioperl_application_installer multi_hmmsearch panalysis papplmaker run_neighbor run_protdist
 	${CP} ${WRKSRC}/scripts/${i}.PLS ${STAGEDIR}${PREFIX}/bin/bp_${i}
 .endfor
 	@${MKDIR} ${STAGEDIR}${DOCSDIR}
 .for doc in AUTHORS Changes INSTALL.PROGRAMS README
 	${INSTALL_DATA} ${WRKSRC}/${doc} ${STAGEDIR}${DOCSDIR}
 .endfor
 
 .include <bsd.port.mk>
diff --git a/biology/p5-bioperl-run/distinfo b/biology/p5-BioPerl-Run/distinfo
similarity index 100%
rename from biology/p5-bioperl-run/distinfo
rename to biology/p5-BioPerl-Run/distinfo
diff --git a/biology/p5-bioperl-run/files/patch-Build.PL b/biology/p5-BioPerl-Run/files/patch-Build.PL
similarity index 100%
rename from biology/p5-bioperl-run/files/patch-Build.PL
rename to biology/p5-BioPerl-Run/files/patch-Build.PL
diff --git a/biology/p5-bioperl-run/pkg-descr b/biology/p5-BioPerl-Run/pkg-descr
similarity index 100%
rename from biology/p5-bioperl-run/pkg-descr
rename to biology/p5-BioPerl-Run/pkg-descr
diff --git a/biology/p5-bioperl-run/pkg-plist b/biology/p5-BioPerl-Run/pkg-plist
similarity index 100%
rename from biology/p5-bioperl-run/pkg-plist
rename to biology/p5-BioPerl-Run/pkg-plist