diff --git a/math/freefem++/Makefile b/math/freefem++/Makefile index e56048a91eaf..beadd9ceff88 100644 --- a/math/freefem++/Makefile +++ b/math/freefem++/Makefile @@ -1,67 +1,75 @@ # Created by: Thierry Thomas PORTNAME= freefem++ -PORTVERSION= 4.6 DISTVERSIONPREFIX= v -PORTREVISION= 5 +DISTVERSION= 4.10 CATEGORIES= math science -MAINTAINER= kh@mogami.com +MAINTAINER= yuri@FreeBSD.org COMMENT= Partial differential equation solver LICENSE= LGPL3 BUILD_DEPENDS= bash:shells/bash \ gmm++>0:math/gmm++ \ pipe:misc/pipe \ tetgen:math/tetgen LIB_DEPENDS= libhdf5.so:science/hdf5 \ + libamd.so:math/suitesparse-amd \ + libcholmod.so:math/suitesparse-cholmod \ + libcolamd.so:math/suitesparse-colamd \ libumfpack.so:math/suitesparse-umfpack \ libarpack.so:math/arpack-ng \ libfftw3.so:math/fftw3 \ libgsl.so:math/gsl \ libipopt.so:math/ipopt \ libmetis.so:math/metis \ libscotch.so:cad/scotch \ libcmumps.so:math/mumps \ libnlopt.so:math/nlopt \ libsuperlu.so:math/superlu \ libsz.so:science/szip RUN_DEPENDS= bash:shells/bash \ pipe:misc/pipe +USES= autoreconf bison blaslapack:openblas compiler:c++11-lib fortran \ + gl gmake localbase perl5 pkgconfig shebangfix xorg + USE_GITHUB= yes GH_ACCOUNT= FreeFem GH_PROJECT= FreeFem-sources -USES= autoreconf bison blaslapack:openblas compiler:c++11-lib fortran \ - gl gmake localbase perl5 pkgconfig shebangfix xorg SHEBANG_GLOB= ff-pkg-download.in SHEBANG_FILES= examples/CheckAllEdp ./examples/misc/speedtest.sh CPPFLAGS+= -I${LOCALBASE}/include/superlu .if !defined{WITH_DEBUG} LDFLAGS+= -s .endif GNU_CONFIGURE= yes CONFIGURE_ENV= CNOFLAGS="${CFLAGS}" LIBS=-lz CONFIGURE_ARGS= --disable-download \ --without-mpi \ --with-blas=${BLASLIB} \ --with-lapack=${LAPACKLIB} USE_GL= gl glu glut OPTIONS_DEFINE= EXAMPLES OPTIONS_DEFAULT=EXAMPLES +PORTEXAMPLES= * + PLIST_SUB= VER=${PORTVERSION} DATADIR= ${PREFIX}/share/FreeFEM/${PORTVERSION} TEST_TARGET= check pre-configure: - ${REINPLACE_CMD} -e 's|-llapack|${LAPACKLIB}|' ${WRKSRC}/configure.ac + @${REINPLACE_CMD} -e 's|-llapack|${LAPACKLIB}|' ${WRKSRC}/configure.ac + +post-install: + @${MV} ${STAGEDIR}${DATADIR}/examples ${STAGEDIR}${EXAMPLESDIR} .include diff --git a/math/freefem++/distinfo b/math/freefem++/distinfo index 339382dd7836..ed5a80d20e3f 100644 --- a/math/freefem++/distinfo +++ b/math/freefem++/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1591981622 -SHA256 (FreeFem-FreeFem-sources-v4.6_GH0.tar.gz) = 6c09af8e189fc02214b0e664b679b49832c134e29cf1ede3cab29cf754f6078f -SIZE (FreeFem-FreeFem-sources-v4.6_GH0.tar.gz) = 12387265 +TIMESTAMP = 1645657269 +SHA256 (FreeFem-FreeFem-sources-v4.10_GH0.tar.gz) = 957994c8f24cc2a671b8c116ae530796c3a431d4157ee71a3d6aab7122e7570d +SIZE (FreeFem-FreeFem-sources-v4.10_GH0.tar.gz) = 12607380 diff --git a/math/freefem++/files/patch-Makefile.am b/math/freefem++/files/patch-Makefile.am deleted file mode 100644 index b66fac3a3a87..000000000000 --- a/math/freefem++/files/patch-Makefile.am +++ /dev/null @@ -1,53 +0,0 @@ ---- Makefile.am.orig 2020-04-02 12:11:06 UTC -+++ Makefile.am -@@ -142,20 +142,17 @@ idp/CC.idp - - FF_MAC_PREFIX=FreeFem++v$(VERSION)$(ADD_PACKAGE_NAME) - --FF_EXAMPLES_FILES=examples/tutorial/aile.msh \ -- examples/tutorial/xyf \ -- examples/3d/dodecaedre01.mesh \ -- examples/3d/lac-leman-v4.msh \ -- examples/load/load.link \ -- examples/load/cube.msh \ -- examples/load/fig.pgm \ -- examples/plugin/lg.pgm \ -- examples/mpi/regtests.sh \ -- examples/misc/speedtest.sh \ -- examples/*/*.edp \ -- examples/CheckAllEdp \ -- examples/plugin/ch.pts \ -- examples/plugin/g.gmesh -+FF_EXAMPLES_FILES=tutorial/aile.msh \ -+ tutorial/xyf \ -+ 3d/dodecaedre01.mesh \ -+ 3d/lac-leman-v4.msh \ -+ plugin/lg.pgm \ -+ mpi/regtests.sh \ -+ misc/speedtest.sh \ -+ */*.edp \ -+ CheckAllEdp \ -+ plugin/ch.pts \ -+ plugin/g.gmesh - - clean-local:: - -find . \( -name '*~' -or -name ListOfUnAllocPtr.bin \) | xargs rm -@@ -259,13 +256,14 @@ clean-local:: - # ---------------------- - install-exec-local:: bin/script/PostInstall.sh FreeFEM-documentation.pdf - test `uname` != Darwin || $(MAKE) FreeFem++-CoCoa bin/script/PostInstall.sh -- $(mkinstalldirs) -m 755 $(DESTDIR)$(pkgdatadir)/$(VERSION) -+ $(mkinstalldirs) -m 755 $(DESTDIR)$(pkgdatadir) \ -+ $(DESTDIR)$(PREFIX)/share/examples/freefem++ - test `uname` != Darwin || $(mkinstalldirs) -m 755 $(DESTDIR)/etc/paths.d/ - test `uname` != Darwin || $(mkinstalldirs) -m 755 $(DESTDIR)/usr/local/bin -- tar cvf - $(FF_EXAMPLES_FILES)| (cd $(DESTDIR)$(pkgdatadir)/$(VERSION); tar xvf -) -- $(INSTALL_SCRIPT) examples/CheckAll examples/CheckAllEdp $(DESTDIR)$(pkgdatadir)/$(VERSION) -+ cd examples ; tar cvf - $(FF_EXAMPLES_FILES) | (cd $(DESTDIR)$(PREFIX)/share/examples/freefem++; tar xvf -) -+ $(INSTALL_SCRIPT) examples/CheckAll examples/CheckAllEdp $(DESTDIR)$(PREFIX)/share/examples/freefem++ - $(mkinstalldirs) -m 755 $(DESTDIR)${bindir} -- test ! -s FreeFEM-documentation.pdf || $(INSTALL_DATA) FreeFEM-documentation.pdf "$(DESTDIR)$(pkgdatadir)" -+ test ! -s FreeFEM-documentation.pdf || $(INSTALL_DATA) FreeFEM-documentation.pdf "$(DESTDIR)$(PREFIX)/share/doc/freefem++" - test `uname` != Darwin || $(INSTALL_SCRIPT) FreeFem++-CoCoa $(DESTDIR)${bindir} - test `uname` != Darwin || echo $(bindir) >$(DESTDIR)/etc/paths.d/FreeFem++ - test `uname` != Darwin || ( rm $(DESTDIR)/usr/local/bin/FreeFem++-CoCoa ; $(INSTALL_SCRIPT) FreeFem++-CoCoa $(DESTDIR)/usr/local/bin ) diff --git a/math/freefem++/files/patch-configure.ac b/math/freefem++/files/patch-configure.ac deleted file mode 100644 index 2f22e6c3da1f..000000000000 --- a/math/freefem++/files/patch-configure.ac +++ /dev/null @@ -1,40 +0,0 @@ ---- configure.ac.orig 2020-04-02 12:11:06 UTC -+++ configure.ac -@@ -65,7 +65,7 @@ m4_define([AC_FF_WHERELIB], - AC_MSG_CHECKING(check $1) - ff_save_libs=$LIBS - LIBS="$LIBS $2 $4" -- AC_LINK_IFELSE([AC_LANG_PROGRAM([m4_if($3,,,[#include <$3>])],[])], [ff_WHERE=yes],[ff_WHERE=no]) -+ AC_LINK_IFELSE([AC_LANG_PROGRAM([m4_if($3,,,[#include <$3>],[#include ],[#include ])],[])], [ff_WHERE=yes],[ff_WHERE=no]) - if test "$ff_WHERE" = "yes" ; then - echo "$1 LD $2" >>$ff_where_lib_conf - ff_WHERE_INC=`AS_DIRNAME(["$3"])` -@@ -674,7 +674,7 @@ ff_prefix_dir_data="$datadir/$PACKAGE_NAME" - ff_prefix_dir_include="$ff_prefix_dir/include" - ff_prefix_dir_etc="$ff_prefix_dir/etc" - ff_prefix_dir_lib_mpi="$ff_prefix_dir/lib/mpi" --ff_prefix_dir_example="$ff_prefix_dir_data/$PACKAGE_VERSION" -+ff_prefix_dir_example="${prefix}/share/examples/freefem++" - AC_SUBST(ff_prefix_dir_lib,$ff_prefix_dir_lib) - AC_SUBST(ff_prefix_dir_include,$ff_prefix_dir_include) - AC_SUBST(ff_prefix_dir_etc,$ff_prefix_dir_etc) -@@ -2084,7 +2084,7 @@ fi - - m4_map([AC_FF_WHERELIB],[ - [[mumps],[-ldmumps -lzmumps -lmumps_common -lpord],[dmumps_c.h],[]], -- [[mumps_seq],[-ldmumps_seq -lzmumps_seq -lmumps_common_seq -lpord_seq -lmpiseq_seq],[dmumps_c.h],[]], -+ [[mumps_seq],[$ff_blas_libs $ff_lapack_lib -ldmumps_seq -lzmumps_seq -lmumps_common_seq -lpord_seq -lmpiseq_seq],[dmumps_c.h],[]], - [[libseq],[-lmpiseq_seq],[${inc_usr_include}mumps_seq/mpi.h]], - [[mumps_ptscotch],[-lpord_ptscotch -lmumps_common_ptscotch -ldmumps_ptscotch -lzmumps_ptscotch -lpord_ptscotch],[dmumps_c.h]], - [[mumps_scotch],[-lpord_scotch -lmumps_common_scotch -ldmumps_scotch -lzmumps_scotch -lpord_scotch],[dmumps_c.h]], -@@ -2092,8 +2092,8 @@ m4_map([AC_FF_WHERELIB],[ - [[superlu],[-lsuperlu],[${inc_usr_include}superlu/superlu_enum_consts.h],[]], - [[blacs],[ -lblacsCinit$ff_with_mpi -lblacsF77init$ff_with_mpi -lblacs$ff_with_mpi],[]], - [[scalapack],[-lscalapack$ff_with_mpi],[]], -- [[scotch],[-lscotch -lscotcherr],[scotch.h]], -- [[ptscotch],[-lptscotch -lptscotcherr],[ptscotch.h]], -+ [[scotch],[-lscotch -lscotcherr], [scotch.h]], -+ [[ptscotch],[-lscotch -lscotcherr -lptscotch -lptscotcherr],[ptscotch.h]], - [[metis],[-lmetis],[${inc_usr_include}metis/metis.h],[]], - [[metis],[-lmetis],[metis.h],[]], - [[parmetis],[-lparmetis -lmetis],[],[]], diff --git a/math/freefem++/files/patch-examples_CMakeLists.txt b/math/freefem++/files/patch-examples_CMakeLists.txt deleted file mode 100644 index d8053141b31d..000000000000 --- a/math/freefem++/files/patch-examples_CMakeLists.txt +++ /dev/null @@ -1,11 +0,0 @@ ---- examples/CMakeLists.txt.orig 2020-04-02 12:11:06 UTC -+++ examples/CMakeLists.txt -@@ -6,7 +6,7 @@ ADD_SUBDIRECTORY(examples) - ADD_SUBDIRECTORY(eigen) - #ADD_SUBDIRECTORY(plugin) - ADD_SUBDIRECTORY(mpi) --ADD_SUBDIRECTORY(other) -+#ADD_SUBDIRECTORY(other) - ADD_SUBDIRECTORY(tutorial) - ADD_SUBDIRECTORY(ffddm) - diff --git a/math/freefem++/pkg-plist b/math/freefem++/pkg-plist index 68e201a6942f..2a16b40c5d59 100644 --- a/math/freefem++/pkg-plist +++ b/math/freefem++/pkg-plist @@ -1,746 +1,236 @@ bin/FreeFem++ bin/FreeFem++-nw bin/bamg bin/cvmsh2 bin/ff-c++ bin/ff-get-dep bin/ff-pkg-download bin/ffglut bin/ffmaster bin/ffmedit lib/ff++/%%VER%%/bin/ff-get-dep lib/ff++/%%VER%%/bin/ff-pkg-download lib/ff++/%%VER%%/%%ETCDIR%%.pref lib/ff++/%%VER%%/idp/CC.idp lib/ff++/%%VER%%/idp/DDM-Schwarz-macro.idp lib/ff++/%%VER%%/idp/DDM-funcs-v2.idp lib/ff++/%%VER%%/idp/ExtractDofsonBorder.idp lib/ff++/%%VER%%/idp/Heat3d.idp lib/ff++/%%VER%%/idp/MPIGMRESmacro.idp lib/ff++/%%VER%%/idp/MPIplot.idp lib/ff++/%%VER%%/idp/MeshSurface.idp lib/ff++/%%VER%%/idp/cobrameshcavity.idp lib/ff++/%%VER%%/idp/cube.idp lib/ff++/%%VER%%/idp/ffddm.idp lib/ff++/%%VER%%/idp/ffddm_coarsemeshCS.idp lib/ff++/%%VER%%/idp/ffddm_functions.idp lib/ff++/%%VER%%/idp/ffddm_geneoCS.idp lib/ff++/%%VER%%/idp/ffddm_geneoCS_3rdlvl.idp +lib/ff++/%%VER%%/idp/ffddm_geneoCS_saddlepoint.idp lib/ff++/%%VER%%/idp/ffddm_parameters.idp lib/ff++/%%VER%%/idp/ffddm_partitioning.idp lib/ff++/%%VER%%/idp/func-max.idp lib/ff++/%%VER%%/idp/getARGV.idp lib/ff++/%%VER%%/idp/gsl.idp lib/ff++/%%VER%%/idp/macro_ddm.idp lib/ff++/%%VER%%/idp/macro_ddm_substructuring.idp lib/ff++/%%VER%%/idp/mortar-msh.idp lib/ff++/%%VER%%/idp/movemeshsmooth.idp lib/ff++/%%VER%%/include/AFunction.hpp lib/ff++/%%VER%%/include/AFunction_ext.hpp lib/ff++/%%VER%%/include/AddNewFE.h lib/ff++/%%VER%%/include/AnyType.hpp lib/ff++/%%VER%%/include/BFGS.hpp lib/ff++/%%VER%%/include/BamgFreeFem.hpp lib/ff++/%%VER%%/include/BrentLS.hpp lib/ff++/%%VER%%/include/CG.hpp lib/ff++/%%VER%%/include/CGNL.hpp lib/ff++/%%VER%%/include/CodeAlloc.hpp lib/ff++/%%VER%%/include/CubicLS.hpp lib/ff++/%%VER%%/include/DOperator.hpp lib/ff++/%%VER%%/include/DataFindBoundary.hpp lib/ff++/%%VER%%/include/FESpace.hpp lib/ff++/%%VER%%/include/FESpacen.hpp lib/ff++/%%VER%%/include/FQuadTree.hpp lib/ff++/%%VER%%/include/GQuadTree.hpp lib/ff++/%%VER%%/include/GenericMesh.hpp lib/ff++/%%VER%%/include/HashMatrix.hpp lib/ff++/%%VER%%/include/HashTable.hpp lib/ff++/%%VER%%/include/HeapSort.hpp lib/ff++/%%VER%%/include/InitFunct.hpp lib/ff++/%%VER%%/include/Label.hpp lib/ff++/%%VER%%/include/LineSearch.hpp lib/ff++/%%VER%%/include/MatriceCreuse.hpp lib/ff++/%%VER%%/include/MatriceCreuse_tpl.hpp lib/ff++/%%VER%%/include/MatriceElementaire.hpp lib/ff++/%%VER%%/include/Mesh1dn.hpp lib/ff++/%%VER%%/include/Mesh2.h lib/ff++/%%VER%%/include/Mesh2dn.hpp lib/ff++/%%VER%%/include/Mesh3dn.hpp lib/ff++/%%VER%%/include/MeshLn.hpp lib/ff++/%%VER%%/include/MeshPoint.hpp lib/ff++/%%VER%%/include/MeshSn.hpp lib/ff++/%%VER%%/include/Meshio.h lib/ff++/%%VER%%/include/Metric.h lib/ff++/%%VER%%/include/NRJ.hpp lib/ff++/%%VER%%/include/NewtonRaphson.hpp lib/ff++/%%VER%%/include/Operator.hpp lib/ff++/%%VER%%/include/Optima.hpp lib/ff++/%%VER%%/include/P1IsoValue.hpp lib/ff++/%%VER%%/include/Param.hpp lib/ff++/%%VER%%/include/PkLagrange.hpp lib/ff++/%%VER%%/include/PlotStream.hpp lib/ff++/%%VER%%/include/QuadTree.h lib/ff++/%%VER%%/include/QuadratureFormular.hpp lib/ff++/%%VER%%/include/R1.hpp lib/ff++/%%VER%%/include/R2.h lib/ff++/%%VER%%/include/R2.hpp lib/ff++/%%VER%%/include/R3.hpp lib/ff++/%%VER%%/include/RNM.hpp lib/ff++/%%VER%%/include/RNM_op.hpp lib/ff++/%%VER%%/include/RNM_opc.hpp lib/ff++/%%VER%%/include/RNM_tpl.hpp lib/ff++/%%VER%%/include/RefCounter.hpp lib/ff++/%%VER%%/include/RosenBrock.hpp lib/ff++/%%VER%%/include/Serialize.hpp lib/ff++/%%VER%%/include/SetOfE4.h lib/ff++/%%VER%%/include/SkyLineSolver.hpp lib/ff++/%%VER%%/include/SolverSkyLine.hpp lib/ff++/%%VER%%/include/SparseLinearSolver.hpp lib/ff++/%%VER%%/include/String.hpp lib/ff++/%%VER%%/include/VirtualMatrix.hpp lib/ff++/%%VER%%/include/VirtualSolver.hpp lib/ff++/%%VER%%/include/VirtualSolverCG.hpp lib/ff++/%%VER%%/include/VirtualSolverSkyLine.hpp lib/ff++/%%VER%%/include/VirtualSolverSparseSuite.hpp lib/ff++/%%VER%%/include/array_init.hpp lib/ff++/%%VER%%/include/array_resize.hpp lib/ff++/%%VER%%/include/array_tlp.hpp lib/ff++/%%VER%%/include/assertion.hpp lib/ff++/%%VER%%/include/bmo.hpp lib/ff++/%%VER%%/include/clapack.h lib/ff++/%%VER%%/include/config.h lib/ff++/%%VER%%/include/defs.hpp lib/ff++/%%VER%%/include/eigenv.h lib/ff++/%%VER%%/include/endian.hpp lib/ff++/%%VER%%/include/environment.hpp lib/ff++/%%VER%%/include/error.hpp lib/ff++/%%VER%%/include/fem.hpp lib/ff++/%%VER%%/include/fem3.hpp lib/ff++/%%VER%%/include/ff++.hpp lib/ff++/%%VER%%/include/ffapi.hpp lib/ff++/%%VER%%/include/ffstack.hpp lib/ff++/%%VER%%/include/getprog-unix.hpp lib/ff++/%%VER%%/include/glrgraph.hpp lib/ff++/%%VER%%/include/gmres.hpp lib/ff++/%%VER%%/include/lex.hpp lib/ff++/%%VER%%/include/lg.tab.hpp lib/ff++/%%VER%%/include/lgfem.hpp lib/ff++/%%VER%%/include/lgmesh3.hpp lib/ff++/%%VER%%/include/lgsolver.hpp lib/ff++/%%VER%%/include/libMesh/chrono.h lib/ff++/%%VER%%/include/libMesh/eigenv.h lib/ff++/%%VER%%/include/libMesh/libmeshb7.h lib/ff++/%%VER%%/include/libMesh/memory.h lib/ff++/%%VER%%/include/libmesh5.h lib/ff++/%%VER%%/include/meshtype.h lib/ff++/%%VER%%/include/mode_open.hpp lib/ff++/%%VER%%/include/msh3.hpp lib/ff++/%%VER%%/include/pcm.hpp lib/ff++/%%VER%%/include/ppmimg.h lib/ff++/%%VER%%/include/problem.hpp lib/ff++/%%VER%%/include/renumb.hpp lib/ff++/%%VER%%/include/rgraph.hpp lib/ff++/%%VER%%/include/showverb.hpp lib/ff++/%%VER%%/include/splitsimplex.hpp lib/ff++/%%VER%%/include/strversionnumber.hpp lib/ff++/%%VER%%/include/throwassert.hpp lib/ff++/%%VER%%/include/ufunction.hpp lib/ff++/%%VER%%/include/versionnumber.hpp lib/ff++/%%VER%%/include/write_hdf5.hpp lib/ff++/%%VER%%/include/write_xdmf.hpp lib/ff++/%%VER%%/lib/BEC.so lib/ff++/%%VER%%/lib/BernardiRaugel.so lib/ff++/%%VER%%/lib/BinaryIO.so lib/ff++/%%VER%%/lib/CircumCenter.so lib/ff++/%%VER%%/lib/ClosePoints.so lib/ff++/%%VER%%/lib/Curvature.so lib/ff++/%%VER%%/lib/DxWriter.so lib/ff++/%%VER%%/lib/Element_HCT.so lib/ff++/%%VER%%/lib/Element_Mixte.so lib/ff++/%%VER%%/lib/Element_Mixte3d.so lib/ff++/%%VER%%/lib/Element_P1bl.so lib/ff++/%%VER%%/lib/Element_P1dc1.so lib/ff++/%%VER%%/lib/Element_P1ncdc.so lib/ff++/%%VER%%/lib/Element_P2bulle3.so lib/ff++/%%VER%%/lib/Element_P2pnc.so lib/ff++/%%VER%%/lib/Element_P3.so lib/ff++/%%VER%%/lib/Element_P3dc.so lib/ff++/%%VER%%/lib/Element_P4.so lib/ff++/%%VER%%/lib/Element_P4dc.so lib/ff++/%%VER%%/lib/Element_PkEdge.so lib/ff++/%%VER%%/lib/Element_QF.so lib/ff++/%%VER%%/lib/FreeFemQA.so +lib/ff++/%%VER%%/lib/Helmholtz_FD.so lib/ff++/%%VER%%/lib/IncompleteCholesky.so -lib/ff++/%%VER%%/lib/MUMPS.so -lib/ff++/%%VER%%/lib/MUMPS_seq.so +lib/ff++/%%VER%%/lib/MatD-VFP0.so lib/ff++/%%VER%%/lib/MetricKuate.so lib/ff++/%%VER%%/lib/MetricPk.so lib/ff++/%%VER%%/lib/Morley.so lib/ff++/%%VER%%/lib/NewSolver.so lib/ff++/%%VER%%/lib/SaveHB.so lib/ff++/%%VER%%/lib/Schur-Complement.so lib/ff++/%%VER%%/lib/SuperLu.so lib/ff++/%%VER%%/lib/UMFPACK64.so lib/ff++/%%VER%%/lib/VTK_writer.so lib/ff++/%%VER%%/lib/VTK_writer_3d.so lib/ff++/%%VER%%/lib/WHERE.libMesh lib/ff++/%%VER%%/lib/WHERE_LIBRARY lib/ff++/%%VER%%/lib/WHERE_LIBRARY-config lib/ff++/%%VER%%/lib/WHERE_LIBRARY-download lib/ff++/%%VER%%/lib/addNewType.so lib/ff++/%%VER%%/lib/bfstream.so lib/ff++/%%VER%%/lib/biofunc.so lib/ff++/%%VER%%/lib/dfft.so 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