diff --git a/science/linux-zotero/Makefile b/science/linux-zotero/Makefile
index 98a01ea33525..8cf918746899 100644
--- a/science/linux-zotero/Makefile
+++ b/science/linux-zotero/Makefile
@@ -1,57 +1,58 @@
 PORTNAME=	zotero
 DISTVERSION=	6.0.10
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science deskutils linux
 MASTER_SITES=	https://download.zotero.org/client/release/${DISTVERSION}/ \
 		https://raw.githubusercontent.com/zotero/zotero-standalone-build/${DISTVERSION}/:LICENSE
 PKGNAMEPREFIX=	linux-
 DISTFILES=	${_MAIN_DISTFILE} \
 		COPYING:LICENSE
 DIST_SUBDIR=	${PORTNAME}
 EXTRACT_ONLY=	${_MAIN_DISTFILE}
 
 MAINTAINER=	0mp@FreeBSD.org
 COMMENT=	Reference management for bibliographic data and research materials
 
 LICENSE=	AGPLv3
 LICENSE_FILE=	${WRKDIR}/COPYING
 
 ONLY_FOR_ARCHS=	amd64
 
 RUN_DEPENDS=	bash:shells/bash
 
 USES=		desktop-file-utils linux tar:bz2
 USE_LINUX=	dbusglib gtk3
 
 NO_BUILD=	yes
 
 SUB_FILES=	zotero-wrapper
 
 WRKSRC=		${WRKDIR}/Zotero_linux-x86_64
 
 _BINARIES=	pdftotext pdfinfo zotero-bin
 _ICONSDIR=	${PREFIX}/share/icons/hicolor
 _ICON_SIZES=	16 32 48 256
 _MAIN_DISTFILE=	Zotero-${DISTVERSION}_linux-x86_64${EXTRACT_SUFX}
 
 post-extract:
 	${CP} ${DISTDIR}/${DIST_SUBDIR}/COPYING ${WRKDIR}
 
 do-configure:
+	${REINPLACE_CMD} 's|%%PREFIX%%|${PREFIX}|g' ${WRKSRC}/${PORTNAME}.desktop
 	(cd ${WRKSRC} && ${BRANDELF} -t Linux ${_BINARIES})
 
 do-install:
 	@${MKDIR} ${STAGEDIR}${DATADIR}
-	(cd ${WRKSRC} && ${COPYTREE_SHARE} . ${STAGEDIR}${DATADIR} "! -name '*.orig'")
+	(cd ${WRKSRC} && ${COPYTREE_SHARE} . ${STAGEDIR}${DATADIR} "! -name '*.orig' ! -name '*.bak'")
 	(cd ${WRKSRC} && ${CHMOD} +x ${_BINARIES})
 # Only strip zotero-bin. Other ${_BINARIES} break strip(1).
 	(cd ${STAGEDIR}${DATADIR} && ${STRIP_CMD} zotero-bin)
 	${MV} ${STAGEDIR}${DATADIR}/zotero.desktop ${STAGEDIR}${DESKTOPDIR}
 	${INSTALL_SCRIPT} ${WRKDIR}/zotero-wrapper ${STAGEDIR}${PREFIX}/bin/zotero
 .for _size in ${_ICON_SIZES}
 	@${MKDIR} ${STAGEDIR}${_ICONSDIR}/${_size}x${_size}/apps
 	${RLN} ${STAGEDIR}${DATADIR}/chrome/icons/default/default${_size}.png \
 		${STAGEDIR}${_ICONSDIR}/${_size}x${_size}/apps/${PORTNAME}.png
 .endfor
 
 .include <bsd.port.mk>
diff --git a/science/linux-zotero/files/patch-zotero.desktop b/science/linux-zotero/files/patch-zotero.desktop
new file mode 100644
index 000000000000..6dee7e42009a
--- /dev/null
+++ b/science/linux-zotero/files/patch-zotero.desktop
@@ -0,0 +1,12 @@
+--- zotero.desktop.orig	2022-07-19 02:55:23 UTC
++++ zotero.desktop
+@@ -1,7 +1,7 @@ Name=Zotero
+ [Desktop Entry]
+ Name=Zotero
+-Exec=bash -c "$(dirname $(realpath $(echo %k | sed -e 's/^file:\/\///')))/zotero -url %U"
+-Icon=zotero.ico
++Exec=%%PREFIX%%/bin/zotero -url %U
++Icon=zotero.png
+ Type=Application
+ Terminal=false
+ Categories=Office;