diff --git a/biology/ugene/Makefile b/biology/ugene/Makefile index 21889e63eaee..4fd816e3b800 100644 --- a/biology/ugene/Makefile +++ b/biology/ugene/Makefile @@ -1,65 +1,66 @@ # Created by: Hannes Hauswedell PORTNAME= ugene PORTVERSION= 38.0 CATEGORIES= biology science MAINTAINER= h2+fbsdports@fsfe.org COMMENT= Integrated bioinformatics toolkit LICENSE= GPLv2+ LICENSE_FILE= ${WRKSRC}/LICENSE.txt BROKEN_aarch64= Fails to build: invokes x86 asm BROKEN_riscv64= Fails to build: invokes x86 asm +BROKEN= Does not fetch: size mismatch (expected 23448730, actual 23446282) RUN_DEPENDS= bash:shells/bash USE_GITHUB= yes GH_ACCOUNT= ugeneunipro USES= desktop-file-utils gl qmake qt:5 shared-mime-info sqlite xorg USE_GL= gl glu USE_QT= buildtools_build linguisttools_build \ core gui network opengl printsupport scripttools script \ sql svg testlib widgets xml \ imageformats_run USE_XORG= x11 xtst QMAKE_ARGS= INSTALL_PREFIX="${PREFIX}" UGENE_INSTALL_DATA="${DATADIR}" \ INSTALL_MANDIR="${MAN1PREFIX}/man" \ UGENE_LRELEASE="${LRELEASE}" UGENE_LUPDATE="${LUPDATE}" \ UGENE_USE_BUNDLED_SQLITE=0 ALL_TARGET= release CXXFLAGS_i386= -msse2 OPTIONS_DEFINE= OPENCL OPENCL_QMAKE_ON= UGENE_OPENCL_DETECTED=1 .include .if ${ARCH} == amd64 # XXX: need to manually tell the build we are on x64 QMAKE_ARGS+= CONFIG+=x64 .endif post-patch: # yes, bash is required, stuff will not execute with sh @${REINPLACE_CMD} -e 's|/bin/bash|/usr/bin/env bash|' \ ${WRKSRC}/src/gen_bin_script.cmd \ ${WRKSRC}/installer/_common_data/ugene @${REINPLACE_CMD} -e 's|-bit version|& for ${OPSYS}/${ARCH}|' \ ${WRKSRC}/src/ugeneui/src/main_window/AboutDialogController.cpp @${REINPLACE_CMD} 's, -lbreakpad$$$$D,,' \ ${WRKSRC}/src/corelibs/U2Private/U2Private.pri \ ${WRKSRC}/src/plugins_checker/plugins_checker.pri \ ${WRKSRC}/src/ugenecl/ugenecl.pri \ ${WRKSRC}/src/ugeneui/ugeneui.pri @${REINPLACE_CMD} -e '218,220s|NULL)|false)|' \ ${WRKSRC}/src/plugins/GUITestBase/src/GTUtilsMdi.cpp post-stage: @cd ${STAGEDIR}${PREFIX} && ${RM} bin/ecp.* lib/ugene/ecp.* .include