Index: head/biology/fasttree/Makefile
===================================================================
--- head/biology/fasttree/Makefile
+++ head/biology/fasttree/Makefile
@@ -1,34 +1,23 @@
-# Created by: Jason Bacon <bacon4000@gmail.com>
 # $FreeBSD$
 
 PORTNAME=	FastTree
-PORTVERSION=	2.1.8
-PORTREVISION=	3
+DISTVERSION=	2.1.10
 CATEGORIES=	biology
 MASTER_SITES=	http://www.microbesonline.org/fasttree/
 EXTRACT_SUFX=	.c
 
-MAINTAINER=	bacon4000@gmail.com
+MAINTAINER=	jwb@FreeBSD.org
 COMMENT=	Approximately-maximum-likelihood phylogenetic trees from alignments
 
-# LICENSE=	unspecified open source
+LICENSE=	GPLv2+
 
 USES=		compiler:openmp
 
-CFLAGS+=	-DOPENMP -fopenmp -O3 -finline-functions -funroll-loops
-LDFLAGS+=	-lm
-
+NO_WRKSUBDIR=	yes
 PLIST_FILES=	bin/FastTree
 
 do-extract:
-	${MKDIR} ${WRKSRC}
-	${CP} ${DISTDIR}/${DISTFILES} ${WRKSRC}
-
-do-build:
-	cd ${WRKSRC} && ${CC} ${CFLAGS} -o FastTree ${DISTFILES} ${LDFLAGS}
-
-do-install:
-	${MKDIR} ${STAGEDIR}${PREFIX}/bin
-	${INSTALL_PROGRAM} ${WRKSRC}/FastTree ${STAGEDIR}${PREFIX}/bin
+	@${CP} ${DISTDIR}/${DISTFILES} ${WRKSRC}
+	@${CP} ${FILESDIR}/Makefile ${WRKSRC}
 
 .include <bsd.port.mk>
Index: head/biology/fasttree/distinfo
===================================================================
--- head/biology/fasttree/distinfo
+++ head/biology/fasttree/distinfo
@@ -1,2 +1,3 @@
-SHA256 (FastTree-2.1.8.c) = b172d160f1b12b764d21a6937c3ce01ba42fa8743d95e083e031c6947762f837
-SIZE (FastTree-2.1.8.c) = 385231
+TIMESTAMP = 1512317739
+SHA256 (FastTree-2.1.10.c) = 54cb89fc1728a974a59eae7a7ee6309cdd3cddda9a4c55b700a71219fc6e926d
+SIZE (FastTree-2.1.10.c) = 390916
Index: head/biology/fasttree/files/Makefile
===================================================================
--- head/biology/fasttree/files/Makefile
+++ head/biology/fasttree/files/Makefile
@@ -0,0 +1,25 @@
+
+BIN =		FastTree
+SRC =		FastTree*.c
+CC ?=		gcc
+CFLAGS ?=	-O3
+CFLAGS +=	-DOPENMP -fopenmp -finline-functions -funroll-loops
+
+MKDIR ?=	mkdir
+INSTALL ?=	install
+PREFIX ?=	/usr/local
+DESTDIR ?=	.
+
+.PHONY:	all install clean
+
+all:	${BIN}
+
+${BIN}: ${SRC} Makefile
+	${CC} ${CFLAGS} ${SRC} -o ${BIN} -lm
+
+install: ${BIN}
+	${MKDIR} -p ${DESTDIR}${PREFIX}/bin
+	${INSTALL} -s -c ${BIN} ${DESTDIR}${PREFIX}/bin
+
+clean:
+	${RM} -f ${BIN}
Index: head/biology/fasttree/files/patch-FastTree-2.1.10.c
===================================================================
--- head/biology/fasttree/files/patch-FastTree-2.1.10.c
+++ head/biology/fasttree/files/patch-FastTree-2.1.10.c
@@ -0,0 +1,11 @@
+--- FastTree-2.1.10.c.orig	2017-12-04 15:09:11 UTC
++++ FastTree-2.1.10.c
+@@ -8759,7 +8759,7 @@ double pnorm(double x)
+ 
+ void *mymalloc(size_t sz) {
+   if (sz == 0) return(NULL);
+-  void *new = malloc(sz);
++  void *new = aligned_alloc(16, sz);
+   if (new == NULL) {
+     fprintf(stderr, "Out of memory\n");
+     exit(1);